GEO Browser - GEO

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302 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Macaca mulatta		SRA Run Selector
GSE41637	Evolutionary dynamics of gene and isoform regulation in mammalian tissues	Expression profiling by high throughput sequencing	Bos taurus Gallus gallus Macaca mulatta Mus musculus Rattus norvegicus	134	GTF SRA Run Selector	Jason Merkin	Dec 21, 2012
GSE63330	DNA methylation in mammalian placentas	Methylation profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Equus caballus Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus Saimiri boliviensis	20	TAR SRA Run Selector	Janine LaSalle	Aug 05, 2015
GSE68507	Cross-species comparison of epigenetic poising in the mammalian germ line	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Bos taurus Gallus gallus Homo sapiens Macaca mulatta Monodelphis domestica Mus musculus	87	TXT SRA Run Selector	Bluma J Lesch	May 07, 2016
GSE167579	Comparative 3D Genome Architecture in Vertebrates (Hi-C)	Other	Bos taurus Canis lupus familiaris Danio rerio Felis catus Gallus gallus Homo sapiens Macaca mulatta Mus musculus Oryctolagus cuniculus Ovis aries Rattus norvegicus	25	BED HDF5 XLS SRA Run Selector	Mengnan He	Apr 12, 2022
GSE167580	Comparative 3D Genome Architecture in Vertebrates (RNA-Seq)	Expression profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Danio rerio Felis catus Gallus gallus Homo sapiens Macaca mulatta Mus musculus Oryctolagus cuniculus Ovis aries Rattus norvegicus Sus scrofa	29	TXT SRA Run Selector	Mengnan He	Apr 12, 2022
GSE114191	Repurposing of promoters and enhancers during mammalian evolution	Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus Oryctolagus cuniculus Rattus norvegicus	78	BW SRA Run Selector	Francesco Nicola Carelli	Oct 01, 2018
GSE130871	Hominin-specific regulatory elements selectively emerged in oligodendrocytes and are disrupted in autism patients	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Pan troglodytes	49	BW NARROWPEAK TXT SRA Run Selector	Menno P Creyghton	Dec 20, 2019
GSE151761	Innovations in primate interneuron repertoire	Expression profiling by high throughput sequencing	Callithrix jacchus Homo sapiens Macaca mulatta Mus musculus Mustela putorius furo	123	TXT SRA Run Selector	Fenna Marie Krienen	Jun 04, 2020
GSE30198	Digital gene expression and global mapping of polyadenylation sites with PolyA-Seq	Expression profiling by high throughput sequencing	Canis lupus familiaris Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus	26	BED SRA Run Selector	Adnan Derti	Jun 25, 2011
GSE65126	Comparative Hi-C reveals that CTCF underlies evolution of chromosomal domain architecture.	Other	Canis lupus familiaris Macaca mulatta Mus musculus Oryctolagus cuniculus	8	TXT SRA Run Selector	Suzana Hadjur	Feb 26, 2015
GSE162142	A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription [RNA-Seq across species]	Expression profiling by high throughput sequencing	Canis lupus familiaris Cavia porcellus Felis catus Gallus gallus Macaca mulatta Mus musculus Oryctolagus cuniculus Ovis aries Rattus norvegicus	142	TXT SRA Run Selector	jin long	Apr 20, 2021
GSE101617	RNA-seq profiling of LPS-treated vs un-treated primary monocytes derived from rhesus macaques and sooty mangabeys	Expression profiling by high throughput sequencing	Cercocebus atys Macaca mulatta	24	TXT SRA Run Selector	Gregory K Tharp	Jan 12, 2018
GSE178225	Tissue-specific transcriptional profiling of plasmacytoid dendritic cells reveals a hyperactivated state in chronic SIV infection	Expression profiling by high throughput sequencing	Cercocebus atys Macaca mulatta	56	TXT SRA Run Selector	Steven E. Bosinger	Jun 15, 2021
GSE108282	Aging African Green Monkeys manifest transcriptional, pathological, and cognitive hallmarks of human Alzheimer’s disease	Expression profiling by high throughput sequencing	Chlorocebus aethiops Macaca mulatta	88	XLS XLSX SRA Run Selector	Keith Tanis	Feb 01, 2018
GSE111077	Wound healing mechanisms in pathogenesis control in natural SIV host species [rectal tissue]	Expression profiling by high throughput sequencing	Chlorocebus aethiops Macaca mulatta	79	TXT SRA Run Selector	Michael Gale, Jr	Sep 20, 2018
GSE111233	Wound healing mechanisms in pathogenesis control in natural SIV host species [monocytes]	Expression profiling by high throughput sequencing	Chlorocebus aethiops Macaca mulatta	45	TXT SRA Run Selector	Michael Gale, Jr	Sep 20, 2018
GSE151814	SIVagm coevolutions lead to altered epigenetic control of CD4 expression [RNA-seq]	Expression profiling by high throughput sequencing	Chlorocebus pygerythrus Erythrocebus patas Macaca mulatta	48	TXT SRA Run Selector	Verena Link	Oct 07, 2020
GSE184949	Similarities and differences in the acute-phase response to SARS-CoV-2 in rhesus macaques and African green monkeys	Expression profiling by high throughput sequencing	Chlorocebus sabaeus Macaca mulatta	44	TXT SRA Run Selector	Joseph C Mudd	Sep 30, 2021
GSE186158	Single-cell transcriptomic atlas reveals the evolution of immune cells and molecules across multiple vertebrate species	Expression profiling by high throughput sequencing	Danio rerio Homo sapiens Macaca mulatta Mus musculus Rattus norvegicus Sus scrofa Xenopus tropicalis	7	TAR SRA Run Selector	Cangang Zhang	Jan 30, 2023
GSE192740	Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches (single cells)	Expression profiling by high throughput sequencing	Danio rerio Gallus gallus Homo sapiens Macaca mulatta Mesocricetus auratus Mus musculus Sus scrofa	132	H5 RDS TSV TXT SRA Run Selector	Liesbet Martens	Jan 11, 2022