GEO Browser - GEO

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302 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Macaca mulatta		SRA Run Selector
GSE163177	3D Genome of macaque fetal brain reveals evolutionary innovations during primate corticogenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	18	BED BEDPE BW HIC NARROWPEAK TXT SRA Run Selector	Yuting Liu	Dec 15, 2020
GSE162142	A Pig BodyMap Transcriptome Reveals Diverse Tissue Physiologies and Evolutionary Dynamics of Transcription [RNA-Seq across species]	Expression profiling by high throughput sequencing	Canis lupus familiaris Cavia porcellus Felis catus Gallus gallus Macaca mulatta Mus musculus Oryctolagus cuniculus Ovis aries Rattus norvegicus	142	TXT SRA Run Selector	jin long	Apr 20, 2021
GSE112356	A genomic study of the contribution of DNA methylation to regulatory evolution in primates	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes	159	RDA TXT SRA Run Selector	Lauren Elizabeth Blake	Sep 25, 2018
GSE178265	A molecular census of midbrain dopaminergic neurons in Parkinsons disease	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Rattus norvegicus Tupaia belangeri	101	MTX TSV SRA Run Selector	Evan Macosko	Jun 16, 2021
GSE64797	A novel analytical brain block tool to enable functional annotation of discriminatory transcript biomarkers among discrete regions of the fronto-limbic circuit in primate brain	Expression profiling by high throughput sequencing	Macaca mulatta	8	FPKM_TRACKING SRA Run Selector	Clifton Lee Dalgard	Jul 31, 2015
GSE73892	A robust single primate neuroepithelial cell clonal expansion system for neural tube development and disease studies	Expression profiling by high throughput sequencing	Macaca mulatta	5	XLS SRA Run Selector	Tianqing Li	Nov 21, 2015
GSE123038	ATAC-seq on primate adipose tissue	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes	13	XLSX SRA Run Selector	Devjanee Swain Lenz	Jan 21, 2019
GSE188879	ATAC-seq profiling in CD14+ cells isolated from rhesus macaques vaccinated with V1-deleted DNA/ALVAC/gp120 vaccine [study 2]	Genome binding/occupancy profiling by high throughput sequencing	Macaca mulatta	24	NARROWPEAK SRA Run Selector	Massimiliano Bissa	Jan 06, 2023
GSE24538	Ab initio identification of transcription start sites (TSSs) in the Rhesus macaque genome by histone modification and RNA-Seq	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Macaca mulatta	3	BED BEDGRAPH TXT SRA Run Selector	Dali Han	Oct 19, 2010
GSE153130	Aberrant Clonal Hematopoiesis following Lentiviral Vector Transduction of HSPCs in a Rhesus Macaque	Other	Macaca mulatta	38	TXT SRA Run Selector	Cynthia E Dunbar	Jun 25, 2020
GSE123936	Accelerated evolution of oligodendrocytes in human brain	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes	95	TXT SRA Run Selector	Genevieve Konopka	Dec 31, 2019
GSE163737	Adult hippocampal neurogenesis in aged macaques and humans	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta	7	H5AD MTX TSV TXT SRA Run Selector	Qiang Ma	Jun 29, 2022
GSE183579	Age-related differences in immune dynamics during SARS-CoV-2 infection in rhesus macaques	Expression profiling by high throughput sequencing	Macaca mulatta	47	TAR SRA Run Selector	Craig Martens	Jan 15, 2022
GSE108282	Aging African Green Monkeys manifest transcriptional, pathological, and cognitive hallmarks of human Alzheimer’s disease	Expression profiling by high throughput sequencing	Chlorocebus aethiops Macaca mulatta	88	XLS XLSX SRA Run Selector	Keith Tanis	Feb 01, 2018
GSE158297	Alarmin S100A8/A9 mediates activation of aberrant neutrophils in the pathogenesis of COVID-19	Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	44	XLSX SRA Run Selector	Xuefei Guo	Jan 19, 2021
GSE60603	An alternative pluripotent state confers interspecies chimaeric competency [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	14	TXT SRA Run Selector	Christopher Benner	May 06, 2015
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gorilla gorilla Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE159347	Analysis of developmental imprinting dynamics in primates using SNP-free methods to identify imprinting defects in cloned placenta	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Macaca fascicularis Macaca mulatta	29	TXT WIG SRA Run Selector	Wenhao Zhang	Sep 07, 2021
GSE69241	Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	27	CUFF SRA Run Selector	Jorge Ruiz-Orera	Sep 01, 2015
GSE94027	Annotation and functional clustering of circRNA expression in rhesus macaque brain during aging	Non-coding RNA profiling by high throughput sequencing	Macaca mulatta	32	TXT SRA Run Selector	dong chen	Nov 26, 2018