GEO Browser - GEO

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175 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Pan troglodytes
GSE13934	A Burst of Segmental Duplications in the African Great Ape Ancestor	Genome variation profiling by genome tiling array	Gorilla gorilla Homo sapiens Macaca mulatta Pan paniscus Pan troglodytes Pongo abelii Pongo pygmaeus pygmaeus	47	PAIR	Tomas Marques-Bonet	Mar 06, 2009
GSE110471	A Comparative Assessment of iPSC Derived Cardiomyocytes with Heart Tissues in Humans and Chimpanzees	Expression profiling by high throughput sequencing	Homo sapiens Pan troglodytes	211	CSV SRA Run Selector	Bryan J Pavlovic	Aug 08, 2018
GSE26033	A Genome-wide Study of DNA Methylation Patterns and Gene Expression Levels in Multiple Human and Chimpanzee Tissues	Methylation profiling by array	Homo sapiens Pan troglodytes	71	TXT	Athma A Pai	Feb 25, 2011
GSE98411	A comparative study of endoderm differentiation in humans and chimpanzees	Expression profiling by high throughput sequencing	Homo sapiens Pan troglodytes	64	TXT SRA Run Selector	Lauren Elizabeth Blake	May 02, 2017
GSE117192	A generally conserved response to hypoxia in iPSC-derived cardiomyocytes from humans and chimpanzees	Expression profiling by high throughput sequencing	Homo sapiens Pan troglodytes	84	TXT SRA Run Selector	Michelle C Ward	Apr 10, 2019
GSE112356	A genomic study of the contribution of DNA methylation to regulatory evolution in primates	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes	159	RDA TXT SRA Run Selector	Lauren Elizabeth Blake	Sep 25, 2018
GSE123038	ATAC-seq on primate adipose tissue	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes	13	XLSX SRA Run Selector	Devjanee Swain Lenz	Jan 21, 2019
GSE123936	Accelerated evolution of oligodendrocytes in human brain	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Pan troglodytes	95	TXT SRA Run Selector	Genevieve Konopka	Dec 31, 2019
GSE136296	Age-Associated Epigenetic Change in Chimpanzees and Humans	Methylation profiling by genome tiling array	Homo sapiens Pan troglodytes	113	CSV IDAT	Elaine Guevara	Aug 23, 2020
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE60603	An alternative pluripotent state confers interspecies chimaeric competency [RNA-Seq]	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	14	TXT SRA Run Selector	Christopher Benner	May 06, 2015
GSE111930	An endogenous retrovirus-derived long non-coding RNA promotes fetal cardiomyocyte migration in primates	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Gorilla gorilla Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	60	BW HIC TDF TXT SRA Run Selector	Lei Tian	Aug 11, 2020
GSE69241	Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing	Expression profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	27	CUFF SRA Run Selector	Jorge Ruiz-Orera	Sep 01, 2015
GSE35567	Analysis of microRNAs in bovine early embryonic development	Expression profiling by array	Ateles sp. Bos taurus Canis lupus familiaris Cricetulus griseus Gorilla gorilla Homo sapiens Lagothrix Lemur catta Macaca mulatta Macaca nemestrina Monodelphis domestica Mus musculus Ovis aries Pan paniscus Pan troglodytes Pongo abelii Rattus norvegicus Rhinopithecus bieti Saguinus imperator Sus scrofa Symphalangus syndactylus	1	TXT	Marc-André Sirard	Feb 08, 2012
GSE96833	Archaic and modern bone DNA methylation maps from the Neanderthal, Denisovan, modern human and chimpanzee	Methylation profiling by high throughput sequencing Third-party reanalysis	Homo sapiens Pan troglodytes	6	BEDGRAPH XLS SRA Run Selector	David Gokhman	Sep 05, 2019
GSE49177	Array-based assay detects genome-wide 5-methylcytosine and 5-hydroxymethlycytosine in non-human primates and mice	Methylation profiling by genome tiling array	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	61	TXT	Pankaj Chopra	Feb 06, 2014
GSE94677	Assessment of DNA methylation patterns in chimpanzee skeletal tissues	Methylation profiling by array	Homo sapiens Pan troglodytes	4	CSV IDAT	Genevieve Housman	Mar 09, 2020
GSE103287	Assessment of DNA methylation patterns related to femur bone morphology in nonhuman primate bone using the 850K array	Methylation profiling by array	Callithrix jacchus Chlorocebus aethiops Homo sapiens Macaca mulatta Pan troglodytes Papio sp.	58	CSV IDAT	Genevieve Housman	Mar 15, 2020
GSE249010	Blood analysis reveals differences in innate inflammatory sensitivity between species	Expression profiling by high throughput sequencing	Bos taurus Homo sapiens Macaca Mus musculus Oryctolagus cuniculus Ovis aries Pan troglodytes Papio anubis Rattus norvegicus Sus scrofa	524	TXT	wenzhong xiao	Jan 02, 2025
GSE109559	Cell type and species-specific methylation patterns in neuronal and non-neuronal cells of human and chimpanzee cortex	Methylation profiling by high throughput sequencing	Homo sapiens Pan troglodytes	12	CSV SRA Run Selector	Christian W. Remmele	Aug 14, 2018