3D genome landscape of Epstein-Barr Virus oncoproteins and virus activated NF-kB in lymphoblastoid cells

AlleleSeq: Analysis of Allele-Specific Expression and Binding in a Network Framework

BI Human Reference Epigenome Mapping Project

Base-resolution analyses of parent-of-origin and sequence dependent allele specific DNA methylation in the mouse genome (MRE-seq)

Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation

Bisulfite sequencing of ChIP DNA on breast cancer cells (HCC1954)

Bisulphite-sequencing of chromatin immunoprecipitated DNA (BisChiP-seq) directly informs methylation status

C1 analysis using mixtures of human (HEK) and mouse (3T3) cells

CTCF Binding Sites by ChIP-seq from ENCODE/University of Washington

Cataloging human PRDM9 variability utilizing long-read sequencing technologies reveals PRDM9 population-specificity and two distinct groupings of related alleles

ChimeraScan: A tool for identifying chimeric transcription in sequencing data

Chromatin Conformation Capture in two biological replicates of K562 cells to identify interactions between tRNA genes in human cells.

Chromatin accessibility mapping for GWAS risk loci reveals compound genetic effects of neurodevelopment and neurodegenerative disorders in human neurons

Comparative methylome analysis of benign and malignant peripheral nerve sheath tumors

Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence

DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions

DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]

DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington

DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy

Deep sequencing reveals distinct patterns of DNA methylation and transcript isoform regulation in prostate cancer