GEO Browser - GEO

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103 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		BAM
GSE17312	BI Human Reference Epigenome Mapping Project	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE17593	Melanoma short-term cultures and cell lines: expression profiling and CNV analyses	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by SNP array	Homo sapiens	41	BAM CEL	Michael Berger	Feb 01, 2010
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE27031	The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BAM CEL	Subhashini Sadasivam	Jan 25, 2012
GSE27619	Deep sequencing reveals distinct patterns of DNA methylation and transcript isoform regulation in prostate cancer	Expression profiling by array Expression profiling by high throughput sequencing Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing	Homo sapiens	39	BAM TXT	Jung Kim	May 03, 2011
GSE31728	Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression	Expression profiling by array Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	67	BAM TXT	Matthew Iyer	Aug 29, 2011
GSE33634	Topoisomerase II inhibitors and histone eviction	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	62	BAM BED	Baoxu Pang	Jun 04, 2013
GSE34558	Diverse epigenetic strategies interact to control epidermal differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BAM	Chandra Chilamakuri	Jun 24, 2012
GSE16256	UCSD Human Reference Epigenome Mapping Project	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE20156	RNA-Seq of melanoma short-term cultures and cell lines	Expression profiling by high throughput sequencing	Homo sapiens	14	BAM SRA Run Selector	Michael Berger	Feb 04, 2010
GSE25183	Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression (RNA-Seq data)	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	58	BAM SRA Run Selector	Matthew Iyer	Aug 02, 2011
GSE25840	Widespread RNA and DNA Sequence Differences in the Human Genome	Expression profiling by high throughput sequencing Third-party reanalysis	Homo sapiens		BAI BAM	Mingyao Li	May 19, 2011
GSE26284	ENCODE Cold Spring Harbor Labs Long RNA-seq	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	84	BAM BB BEDRNAELEMENTS BIGWIG GFF GTF PDF SRA Run Selector	ENCODE DCC	Dec 28, 2010
GSE26811	Transcriptomics of a novel trophoblast differentiation protocol applied to human embryonic stem cells	Expression profiling by high throughput sequencing	Homo sapiens	5	BAM SRA Run Selector	Paul Robson	May 01, 2014
GSE27221	ENCODE Genome Institute of Singapore RNA-Seq	Expression profiling by high throughput sequencing	Homo sapiens	4	BAM BIGWIG SRA Run Selector	ENCODE DCC	Feb 14, 2011
GSE29069	Global DNA Hypomethylation Coupled to Repressive Chromatin Domain Formation and Gene Silencing in Breast Cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	14	BAM	Gary Chung Hon	Sep 16, 2011
GSE29098	ChimeraScan: A tool for identifying chimeric transcription in sequencing data	Expression profiling by high throughput sequencing	Homo sapiens	3	BAM BEDPE SRA Run Selector	Matthew Iyer	Sep 01, 2011
GSE29119	Gene expression analysis of breast cancer (HCC1954) and normal breast cells (HMEC)	Expression profiling by high throughput sequencing	Homo sapiens	2	BAM SRA Run Selector	Gary Chung Hon	Sep 16, 2011
GSE29155	RNA-Seq anlalysis of prostate cancer cell lines using Next Generation Sequencing	Expression profiling by high throughput sequencing	Homo sapiens	11	BAM SRA Run Selector	Jung Kim	May 09, 2011