GEO Browser - GEO

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12158 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		BED
GSE8489	ChIP-chip analysis of transcription factors GABP, SRF, TAF, and NRSF on Affymetrix whole genome tiling arrays 2.0R	Genome binding/occupancy profiling by genome tiling array	Homo sapiens	119	BAR BED CEL	David Scott Johnson	Jul 19, 2007
GSE8962	Tissue/Cell DNaseI sensitivity/hypersensitivity screening	Genome binding/occupancy profiling by genome tiling array	Homo sapiens	59	BED CEL	John A Stamatoyannopoulos	Sep 30, 2007
GSE11298	Tissue/Cell DNaseI sensitivity/hypersensitivity screening II	Genome binding/occupancy profiling by genome tiling array	Homo sapiens	119	BED CEL	John A Stamatoyannopoulos	Apr 30, 2008
GSE13008	Genome-wide mapping of RNA Polymerase II binding sites	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED TXT SRA Run Selector	Flora Vaccarino	Oct 02, 2008
GSE12889	CTCF demarcates chromatin domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED CEL TXT SRA Run Selector	Raja Jothi	Oct 20, 2008
GSE12360	Genome-wide analysis of H3K79 methylation in CD34+ CD19+ cells from normal marrow, MLL-rearranged or MLL-germline ALL	Genome binding/occupancy profiling by genome tiling array	Homo sapiens	3	BAR BED BPMAP CEL	Madeleine E. Lemieux	Nov 04, 2008
GSE12363	H3K79 methylation profiles define murine and human MLL-AF4 leukemias	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Homo sapiens Mus musculus	49	BAR BED CEL	Madeleine E. Lemieux	Nov 04, 2008
GSE13518	Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED TXT SRA Run Selector	Leighton James Core	Dec 04, 2008
GSE12646	Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24	BED CEL CHP TXT SRA Run Selector	Chongzhi Zang	Jan 09, 2009
GSE14535	mRNP-mRNA Association Map (Tier I - G10, HuR, Imp, PABP)	Other	Homo sapiens	33	BED CEL PDF TXT	Sridar V Chittur	Jan 24, 2009
GSE14603	Gene Body Hypermethylation of ATM in Peripheral Blood DNA of Bilateral Breast Cancer Patients	Methylation profiling by genome tiling array	Homo sapiens	14	BED GFF PAIR WIG	James Flanagan	Jan 29, 2009
GSE14664	ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TXT SRA Run Selector	H.G. Stunnenberg	Mar 09, 2009
GSE15220	Genome-wide analysis of differential methylation and gene expression in a testicular cancer cell line	Expression profiling by array Methylation profiling by genome tiling array	Homo sapiens	13	BAR BED CEL CHP	Hoi Hung Cheung	Mar 18, 2009
GSE15805	Duke-UNC-Texas-EBI ENCODE expression project	Expression profiling by array	Homo sapiens	155	BED CEL	Sridar V Chittur	Apr 23, 2009
GSE15007	Digital DNA methylation analysis of stem cell reprogramming by targeted bisulfite sequencing	Methylation profiling by high throughput sequencing	Homo sapiens	12	BED TXT	Kun Zhang	Apr 27, 2009
GSE16347	Genome-wide HIF-1 binding sites in HepG2 cells	Genome binding/occupancy profiling by genome tiling array	Homo sapiens	14	BAR BED CEL	Xiaobo Xia	Jun 02, 2009
GSE12616	Genome-wide Analysis of Histone Methylations in Memory CD8+ T Cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED GRAPH SRA Run Selector	Chongzhi Zang	Jun 12, 2009
GSE17001	High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED TXT SRA Run Selector	Emily Hodges	Jul 08, 2009
GSE13308	Chromatin architecture organized by histone variants H3.3 and H2A.Z in the human genome	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED TXT SRA Run Selector	Chongzhi Zang	Jul 26, 2009
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009