GEO Browser - GEO

Series

Samples

Platforms

DataSets

7492 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		BED	ENCODE DCC
GSE19090	Exon arrays of ENCODE tier 1, tier 2 and tier 3 cell types	Expression profiling by array	Homo sapiens	182	BED BROADPEAK CEL	ENCODE DCC	Nov 19, 2009
GSE27584	DNA Methylation by Reduced Representation Bisulfite Seq from ENCODE/HudsonAlpha	Methylation profiling by high throughput sequencing	Homo sapiens	202	BED BEDRRBS SRA Run Selector	ENCODE DCC	Mar 01, 2011
GSE33600	RNA Subcellular Localization by Paired End diTag Sequencing from ENCODE/GIS	Expression profiling by high throughput sequencing	Homo sapiens	31	BED BIGWIG SRA Run Selector	ENCODE DCC	Nov 10, 2011
GSE34399	Replication Timing by Repli-seq from ENCODE/University of Washington	Other	Homo sapiens	15	BED BIGWIG SRA Run Selector	ENCODE DCC	Apr 27, 2012
GSE34448	RNA Subcellular CAGE Localization from ENCODE/RIKEN	Expression profiling by high throughput sequencing	Homo sapiens	78	BED BEDRNAELEMENTS BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Dec 16, 2011
GSE38163	Chromatin State Segmentation by HMM from ENCODE/Broad	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BED	ENCODE DCC	May 24, 2012
GSE39495	Chromatin Interaction Analysis Paired-End Tags (ChIA-PET) from ENCODE/GIS-Ruan	Other	Homo sapiens	8	BED BIGWIG SRA Run Selector	ENCODE DCC	Jul 19, 2012
GSE39510	Chromatin Interactions by 5C from ENCODE/Dekker Univ. Mass.	Other	Homo sapiens	4	BED MATRIX TXT SRA Run Selector	ENCODE DCC	Jul 19, 2012
GSE40700	CpG Methylation by Illumina Methyl27 Bead Arrays from ENCODE/HAIB	Methylation profiling by array	Homo sapiens	63	BED BED9	ENCODE DCC	Sep 07, 2012
GSE40833	DNaseI/FAIRE/ChIP Synthesis from ENCODE/OpenChrom(Duke/UNC/UTA)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	BED	ENCODE DCC	Sep 12, 2012
GSE51334	DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions	Other	Homo sapiens Mus musculus	993	BAM BED BIGWIG BROADPEAK NARROWPEAK PAIR TSV TXT	ENCODE DCC	Nov 20, 2014
GSE51336	Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	266	BAM BED BIGWIG BROADPEAK NARROWPEAK WIG	ENCODE DCC	Nov 20, 2014
GSE51341	Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence	Other	Homo sapiens Mus musculus	32	BAM BED BIGWIG BROADPEAK NARROWPEAK TXT WIG	ENCODE DCC	Nov 19, 2014
GSE59395	Genome-wide map of regulatory interactions in the human genome	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED TXT SRA Run Selector	ENCODE DCC	Aug 21, 2014
GSE78585	polyA mRNA RNA-seq from fibroblast of lung (ENCSR000COO)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78586	polyA mRNA RNA-seq from mammary epithelial cell (ENCSR000COX)	Expression profiling by high throughput sequencing	Homo sapiens	1	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78587	polyA mRNA RNA-seq from skeletal muscle myoblast (ENCSR000COY)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78588	polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000COZ)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78589	polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000CPA)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78590	polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000CPB)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016