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11664 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		BIGWIG
GSE90599	Che-1 sustains hypoxic response of colorectal cancer cells by affecting Hif-1α stabilization	Expression profiling by high throughput sequencing	Homo sapiens	4	BIGWIG TSV SRA Run Selector	Matteo Pallocca	Jun 12, 2017
GSE212882	5-Hydroxymethylcytosine Profiling of Cell-Free DNA Identifies Bivalent Genes That Are Prognostic of Survival in High-Risk Neuroblastoma	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	148	BIGWIG TXT	Mark Applebaum	Feb 01, 2024
GSE212874	5-Hydroxymethylcytosine Profiling of Cell-Free DNA Identifies Bivalent Genes That Are Prognostic of Survival in High-Risk Neuroblastoma [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	96	BIGWIG	Mark Applebaum	Feb 01, 2024
GSE212881	5-Hydroxymethylcytosine Profiling of Cell-Free DNA Identifies Bivalent Genes That Are Prognostic of Survival in High-Risk Neuroblastoma [KAS-Seq]	Other	Homo sapiens	16	BIGWIG	Mark Applebaum	Feb 01, 2024
GSE63058	7q11.23 dosage-dependent dysregulation in the human pluripotent state primes aberrant transcriptional programs in disease-relevant lineages	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by SNP array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	139	BIGBED BIGWIG CEL CYCHP	Giuseppe Testa	Dec 15, 2014
GSE63057	7q11.23 dosage-dependent dysregulation in the human pluripotent state primes aberrant transcriptional programs in disease-relevant lineages (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BIGBED BIGWIG SRA Run Selector	Giuseppe Testa	Dec 15, 2014
GSE149268	A Chromatin Accessibility Atlas of the Developing Human Telencephalon	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	40	BED BIGWIG NARROWPEAK	John Rubenstein	Apr 25, 2020
GSE66298	A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	136	BIGWIG CEL IDAT TXT	David Soong	Jul 14, 2015
GSE66297	A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BIGWIG TXT SRA Run Selector	David Soong	Jul 14, 2015
GSE124197	A Genome-wide CRISPR-Based Screen Identifies KAT7 as a Senescence Driver	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens Mus musculus	71	BED BIGWIG TXT SRA Run Selector	Yuxuan Zheng	Oct 09, 2020
GSE104690	A Non-canonical BCOR-PRC1.1 Complex Represses Differentiation Programs in Human ESCs	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BIGWIG BROADPEAK CSV SRA Run Selector	Micah Gearhart	Jan 11, 2018
GSE109690	A Nucleosome Destabilizing Factor that Facilitates Transcription in Chromatin	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	28	BED BIGWIG BW TXT SRA Run Selector	Jia Fei	Apr 16, 2018
GSE104309	A TFIID-SAGA perturbation that targets MYB and suppresses acute myeloid leukemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	36	BIGWIG	Yali XU	Jan 08, 2018
GSE117283	A bipartite boundary element restricts UBE3A imprinting to mature neurons	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	12	BIGBED BIGWIG BW NARROWPEAK SRA Run Selector	Justin Cotney	Jan 07, 2019
GSE180691	A cohesin traffic pattern genetically linked to gene regulation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	158	BIGWIG BW	Anne-Laure Valton	Aug 15, 2022
GSE180690	A cohesin traffic pattern genetically linked to gene regulation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BED BIGWIG SRA Run Selector	Anne-Laure Valton	Aug 15, 2022
GSE118638	A distinct isoform of ZNF207 controls self-renewal and pluripotency of human embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	5	BIGWIG	Fang Fang	Aug 17, 2018
GSE118632	A distinct isoform of ZNF207 controls self-renewal and pluripotency of human embryonic stem cells [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BIGWIG SRA Run Selector	Fang Fang	Aug 17, 2018
GSE172329	A genome-wide CRISPR-Cas9 knockout screen identifies essential and growth-restricting genes in human trophoblast stem cells	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	56	BEDGRAPH BIGWIG TXT SRA Run Selector	Shuhua Fu	Apr 11, 2022
GSE186458	A human DNA methylation atlas reveals principles of cell type-specific methylation and identifies thousands of cell type-specific regulatory elements	Methylation profiling by high throughput sequencing	Homo sapiens	253	BED BETA BIGWIG CSI PAT TBI	Tommy Kaplan	Mar 02, 2022