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6202 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		BW
GSE24166	Chromatin enrichment of TRIM24, estrogen receptor and H3K4me2 in estrogen-treated and -untreated MCF7 cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED BW SRA Run Selector	Bruce J Aronow	Sep 17, 2010
GSE23436	Histone methylation and transcription factor binding during intestinal cell differentation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	17	BED BW CEL TXT SRA Run Selector	Michael P Verzi	Nov 17, 2010
GSE33816	RNA-seq analysis of K562 cells (K562-shX) with stable integration of a tet-inducible shRNA targeting a candidate (X) transcription factor from ENCODE/HudsonAlpha-MyersLab	Expression profiling by high throughput sequencing	Homo sapiens	12	BAM BW GTF SRA Run Selector	Anita Bansal	Dec 01, 2011
GSE32509	Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	59	BED BW SRA Run Selector	Kevin Dong	Dec 23, 2011
GSE33664	Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	10	BAM BED BW TXT SRA Run Selector	Guoliang Li	Jan 20, 2012
GSE35468	Transcriptome profiling of epidermal differentiation	Expression profiling by high throughput sequencing	Homo sapiens	3	BW SRA Run Selector	Douglas Porter	Feb 02, 2012
GSE33092	Oncogenic BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration [HT-seq]	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	4	BW GTF SRA Run Selector	Douglas Porter	Apr 28, 2012
GSE37169	Oncogenic BRAFV600E remodels the melanocyte transcriptome and induces BANCR to regulate melanoma cell migration	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by array	Homo sapiens	7	BW CEL GTF	Douglas Porter	Apr 28, 2012
GSE29714	Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3' UTRs and Near Stop Codons	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BW TXT SRA Run Selector	Christopher E Mason	May 17, 2012
GSE33571	Disrupted transcriptional network in ΔNp63 AEC tissue model [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED BW SAM SRA Run Selector	Douglas Porter	Jun 18, 2012
GSE33572	Disrupted transcripitonal network in ΔNp63 AEC tissue model	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	BED BW CEL SAM	Douglas Porter	Jun 18, 2012
GSE39237	H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	7	BW SRA Run Selector	Kevin Dong	Jul 20, 2012
GSE38861	ASXL1 Mutations Promote Myeloid Transformation Through Loss of PRC2-Mediated Gene Repression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BW SRA Run Selector	Richard Koche	Aug 21, 2012
GSE36213	Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE	Expression profiling by high throughput sequencing	Drosophila melanogaster Homo sapiens	37	BED BW	Philippe Batut	Aug 29, 2012
GSE36200	RAMPAGE dataset for the human K562 cell line	Expression profiling by high throughput sequencing	Homo sapiens	1	BED BW SRA Run Selector	Philippe Batut	Aug 30, 2012
GSE41048	Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues (ChIP-Seq and MeDIP-Seq)	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	21	BW SRA Run Selector	Gilad Landan	Sep 24, 2012
GSE41050	Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	35	BW CEL	Gilad Landan	Sep 24, 2012
GSE38685	Normal and Cancerous Prostate Cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BW	Aaron Statham	Oct 16, 2012
GSE41000	SIRT3 functions in the nucleus in the control of stress-related gene expression.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BW SRA Run Selector	Roberto Bonasio	Oct 16, 2012
GSE39096	Spark: A navigational paradigm for genomic data exploration	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	1	BW PDF TXT WIG SRA Run Selector	Henriette O'Geen	Nov 06, 2012