GEO Browser - GEO

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446 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		GTF
GSE184078	Interaction of V. cholerae with human macrophages	Expression profiling by high throughput sequencing	Vibrio cholerae O1 biovar El Tor Homo sapiens	36	CSV GTF TXT XLSX SRA Run Selector	Lucia Vidakovic	May 11, 2023
GSE63473	Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets	Expression profiling by high throughput sequencing Other	synthetic construct Mus musculus Homo sapiens	203	BAM FASTA GTF TXT	Evan Macosko	May 20, 2015
GSE77072	Spliced synthetic genes as internal controls in RNA sequencing experiments.	Expression profiling by high throughput sequencing	synthetic construct Homo sapiens	10	GTF SRA Run Selector	Simon Andrew Hardwick	Jul 21, 2016
GSE134311	scRCAT-seq: simultaneously profile RNA TSS and TES at single-cell level	Expression profiling by high throughput sequencing	synthetic construct Mus musculus Homo sapiens	116	BED CSV GTF MTX TSV TXT SRA Run Selector	Jiawei Zhong	Aug 24, 2020
GSE36114	Genome-wide analysis of histone modification, protein-DNA binding, cytosine methylation and transcriptome data in mouse and human ES cells and pig iPS cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Sus scrofa Mus musculus Homo sapiens	47	BAM BED GTF TXT SRA Run Selector	Pengfei Yu	Feb 28, 2012
GSE119095	Cartilaginous and osteochondral tissue formation by human mesenchymal stem cells on three-dimensionally woven scaffolds	Expression profiling by high throughput sequencing	Rattus norvegicus Homo sapiens Bos taurus	3	FA GTF TXT SRA Run Selector	Charles Arthur Whittaker	Aug 25, 2020
GSE162152	Identification and evolutionary comparison of circular RNAs in five mammalian species and three organs.	Expression profiling by high throughput sequencing	Rattus norvegicus Mus musculus Monodelphis domestica Macaca mulatta Homo sapiens	84	GTF TXT SRA Run Selector	Franziska Gruhl	Sep 21, 2021
GSE106245	Human embryonic stem cell, chimpanzee induced pluripotent stem cell, orangutan induced pluripotent stem cell, rhesus embryonic stem cell, and their derived cortical organoid RNA-seq	Expression profiling by high throughput sequencing	Pongo abelii Pan troglodytes Macaca mulatta Homo sapiens	55	GTF TAR TSV TXT SRA Run Selector	Andrew Ryan Field	May 31, 2018
GSE230441	Isoform-specific translational control is evolutionarily conserved in primates	Other	Pongo abelii Pan troglodytes Homo sapiens	30	GTF TSV	Jeremy Sanford	Apr 30, 2024
GSE127774	Transcriptome map of the human brain at the single-cell resolution	Expression profiling by high throughput sequencing	Pan troglodytes Pan paniscus Macaca mulatta Homo sapiens	17	FA GTF MTX RDS TSV TXT SRA Run Selector	Ilia Kurochkin	Jan 30, 2020
GSE184768	Genetic studies of human-chimpanzee divergence using stem cell fusions	Expression profiling by high throughput sequencing	Pan troglodytes Homo sapiens	69	GTF TXT SRA Run Selector	Janet Song	Nov 29, 2021
GSE201516	The relationship between regulatory changes in cis and trans and the evolution of gene expression in humans and chimpanzees	Expression profiling by high throughput sequencing	Pan troglodytes Homo sapiens	22	CSV GTF H5SEURAT MTX VCF	Yoav Gilad	Apr 11, 2023
GSE40890	Characteristics of Cross-Hybridization and Cross-Alignment in Pseudo-Xenograft samples by RNA-Seq and Microarrays [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus Homo sapiens	19	GTF TXT SRA Run Selector	Camilo Valdes	Dec 14, 2012
GSE48305	Orchestrated intron retention regulates normal granulocyte differentiation [RNA-Seq]	Expression profiling by high throughput sequencing	Mus musculus Homo sapiens	5	GTF SRA Run Selector	william ritchie	Jun 27, 2013
GSE48307	Orchestrated intron retention regulates normal granulocyte differentiation	Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus Homo sapiens	11	CEL GTF	william ritchie	Jun 27, 2013
GSE49417	The conserved organization of the human and mouse transcriptomes	Expression profiling by high throughput sequencing	Mus musculus Homo sapiens	64	BAM BEDRNAELEMENTS BIGWIG GFF GTF PDF	ENCODE DCC	Nov 20, 2014
GSE62486	T-bet recruits P-TEFb to super-enhancers to regulate T helper cell differentiation	Expression profiling by high throughput sequencing Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Homo sapiens	143	BED GTF TXT	Richard Jenner	Jun 08, 2016
GSE63782	Transcriptional plasticity promotes primary and acquired resistance to BET bromodomain inhibition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus Homo sapiens	103	BED BW GTF TSV SRA Run Selector	Philipp Rathert	Sep 08, 2015
GSE97211	High-confidence Coding and Noncoding Transcriptome Maps	Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus Homo sapiens		GTF TXT XLS	Jin-Wu Nam	Apr 01, 2017
GSE97212	The Project for High-Confidence Coding and Noncoding Transcriptome Maps	Expression profiling by high throughput sequencing Third-party reanalysis	Mus musculus Homo sapiens	2	GTF	Jin-Wu Nam	Apr 01, 2017