613 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
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GSE63525
A three-dimensional map of the human genome at kilobase resolution reveals prinicples of chromatin looping
200 Suhas Rao Dec 11, 2014
GSE71831
Deletion of DXZ4 on the human inactive X chromosome eliminates superdomains and impairs gene silencing
101 Miriam Huntley Jul 19, 2016
GSE80820
HiChIP: Efficient and sensitive analysis of protein-directed genome architecture
18 Ryan Alexander Flynn Aug 31, 2016
GSE92793
Hi-C from A549 (ENCSR244BBG)
  • Link icon Homo sapiens
7 ENCODE DCC Jan 10, 2017
GSE92804
Hi-C from A549 (ENCSR393LOP)
  • Link icon Homo sapiens
8 ENCODE DCC Jan 10, 2017
GSE92811
Hi-C from A549 (ENCSR499RVD)
  • Link icon Homo sapiens
8 ENCODE DCC Jan 10, 2017
GSE92819
Hi-C from A549 (ENCSR662QKG)
  • Link icon Homo sapiens
8 ENCODE DCC Jan 10, 2017
GSE92825
Hi-C from A549 (ENCSR757IVO)
  • Link icon Homo sapiens
8 ENCODE DCC Jan 10, 2017
GSE98119
The energetics and physiological impact of cohesin extrusion
352 Seolkyoung Jung May 01, 2018
GSE98552
Chromatin structure and CTCF across the MCF10 breast cancer progression series (HiC)
  • Link icon Homo sapiens
4 Jonathan AR Gordon May 23, 2017
GSE102884
Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL and PDS5 proteins
  • Link icon Homo sapiens
30 Roman R Stocsits Dec 07, 2017
GSE103477
Transcription elongation regulates genome 3D structure
  • Link icon Homo sapiens
253 Christopher Benner Aug 23, 2018
GSE104333
Cohesin loss eliminates all loop domains [HiC]
  • Link icon Homo sapiens
77 Suhas Rao Oct 05, 2017
GSE104334
Cohesin loss eliminates all loop domains
  • Link icon Homo sapiens
132 Suhas Rao Oct 05, 2017
GSE104579
DNA methylation state is associated with the formation of loops and links in hematopoietic stem cells
  • Link icon Homo sapiens
18 Jianzhong Su Nov 24, 2017
GSE105028
Architectural proteins and pluripotency factors cooperate to orchestrate the transcriptional response of hESCs to temperature stress
  • Link icon Homo sapiens
93 Victor Corces Aug 03, 2018
GSE107148
DNA methylation state is associated with the formation of loops and links in hematopoietic stem cells [HiC]
  • Link icon Homo sapiens
4 Jianzhong Su Nov 24, 2017
GSE107447
Altered chromosomal topology drives oncogenic programs in SDH-deficient GISTs
  • Link icon Homo sapiens
100 Yotam Drier Oct 16, 2019
GSE108869
An alternative CTCF isoform antagonizes canonical CTCF occupancy and changes chromatin architecture to promote apoptosis
  • Link icon Homo sapiens
30 Kaimeng Huang Jan 12, 2019
GSE109924
TAD cliques shape the 4-dimensional genome during dual lineage terminal differentiation
  • Link icon Homo sapiens
34 Philippe Collas Feb 23, 2019