Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genes

Treehouse compendium of RNA-Seq gene expression data from tumors

Integrative analysis of competing endogenous RNA networks reveals the functional lncRNAs in Alzheimer’s diseased

Revealing the Key Regulators of Cell Identity in the Human Adult Pancreas [scRNA-seq]

A pooled treatment-curated breast cancer gene-expression dataset

Treehouse compendium of polyA selected RNA-Seq gene expression data from 33 PDX

Treehouse compendium of polyA selected RNA-Seq gene expression data from 932 cell lines

Treehouse compendium of polyA selected RNA-Seq gene expression data from 12,747 tumors

Treehouse compendium of ribosomal-depletion RNA-Seq gene expression data from 43 PDX

Treehouse compendium of ribosomal-depletion RNA-Seq gene expression data from 296 tumors

Genome-wide binding map of the HIV Tat protein to the human genome (ChIP-chip)

Identification and characterization of MCF01A circular RNAs [ChIP-seq]

small RNA-seq from urinary bladder (ENCSR000AFP)

small RNA-seq from liver (ENCSR000AFV)

single cell RNA-seq from GM12878 (ENCSR000AIY)

single cell RNA-seq from GM12878 (ENCSR000AJA)

single cell RNA-seq from GM12878 (ENCSR000AJB)

single cell RNA-seq from GM12878 (ENCSR000AJC)

single cell RNA-seq from GM12878 (ENCSR000AJE)

single cell RNA-seq from GM12878 (ENCSR000AJF)