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12085 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Homo sapiens		TXT	ENCODE DCC
GSE33480	RNA-seq from ENCODE/Caltech	Expression profiling by high throughput sequencing	Homo sapiens	24	BAI BAM BIGBED BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Jul 12, 2012
GSE24565	Small RNA-seq from ENCODE/Cold Spring Harbor Lab	Non-coding RNA profiling by high throughput sequencing	Homo sapiens	87	BAM BEDRNAELEMENTS BIGWIG GTF PDF TXT SRA Run Selector	ENCODE DCC	Oct 08, 2010
GSE26328	DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	53	BAM BIGWIG BROADPEAK NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Dec 29, 2010
GSE29611	Histone Modifications by ChIP-seq from ENCODE/Broad Institute	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	296	BAM BIGWIG BROADPEAK TXT SRA Run Selector	ENCODE DCC	Jun 02, 2011
GSE30567	ENCODE Cold Spring Harbor Labs Long RNA-seq (hg19)	Expression profiling by high throughput sequencing	Homo sapiens	99	BAM BEDRNAELEMENTS BIGWIG GFF GTF PDF TXT SRA Run Selector	ENCODE DCC	Jul 13, 2011
GSE51334	DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions	Other	Homo sapiens Mus musculus	993	BAM BED BIGWIG BROADPEAK NARROWPEAK PAIR TSV TXT	ENCODE DCC	Nov 20, 2014
GSE51341	Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence	Other	Homo sapiens Mus musculus	32	BAM BED BIGWIG BROADPEAK NARROWPEAK TXT WIG	ENCODE DCC	Nov 19, 2014
GSE34448	RNA Subcellular CAGE Localization from ENCODE/RIKEN	Expression profiling by high throughput sequencing	Homo sapiens	78	BED BEDRNAELEMENTS BIGWIG GTF TXT SRA Run Selector	ENCODE DCC	Dec 16, 2011
GSE39510	Chromatin Interactions by 5C from ENCODE/Dekker Univ. Mass.	Other	Homo sapiens	4	BED MATRIX TXT SRA Run Selector	ENCODE DCC	Jul 19, 2012
GSE59395	Genome-wide map of regulatory interactions in the human genome	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED TXT SRA Run Selector	ENCODE DCC	Aug 21, 2014
GSE78585	polyA mRNA RNA-seq from fibroblast of lung (ENCSR000COO)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78586	polyA mRNA RNA-seq from mammary epithelial cell (ENCSR000COX)	Expression profiling by high throughput sequencing	Homo sapiens	1	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78587	polyA mRNA RNA-seq from skeletal muscle myoblast (ENCSR000COY)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78588	polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000COZ)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78589	polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000CPA)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78590	polyA mRNA RNA-seq from endothelial cell of umbilical vein (ENCSR000CPB)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78591	polyA depleted RNA-seq from keratinocyte (ENCSR000CPI)	Expression profiling by high throughput sequencing	Homo sapiens	3	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78592	polyA mRNA RNA-seq from keratinocyte (ENCSR000CPJ)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78593	polyA mRNA RNA-seq from keratinocyte (ENCSR000CPK)	Expression profiling by high throughput sequencing	Homo sapiens	2	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016
GSE78594	polyA mRNA RNA-seq from keratinocyte (ENCSR000CPL)	Expression profiling by high throughput sequencing	Homo sapiens	3	BED BIGBED BIGWIG GTF TSV TXT	ENCODE DCC	Mar 18, 2016