GEO Browser - GEO

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69 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Bos taurus		CSV
GSE223748	Mammalian Methylation Consortium	Methylation profiling by array	Acinonyx jubatus Acomys cahirinus Addax nasomaculatus Aepyceros melampus Alexandromys fortis Alexandromys maximowiczii Alexandromys mongolicus Alexandromys oeconomus Alticola barakshin Alticola semicanus Amblysomus hottentotus Antidorcas marsupialis Antrozous pallidus Aonyx cinereus Aplodontia rufa Apodemus agrarius Apodemus peninsulae Apodemus sylvaticus Apodemus uralensis Artibeus jamaicensis Arvicanthis niloticus Asellia tridens Atelerix albiventris Balaena mysticetus Balaenoptera borealis Balaenoptera musculus Bathyergus janetta Bathyergus suillus Blarina brevicauda Bos taurus Bradypus variegatus Cabassous unicinctus Caenolestes fuliginosus Callithrix geoffroyi Callithrix jacchus Callospermophilus lateralis Callospermophilus saturatus Canis latrans Canis lupus familiaris Capra hircus Capreolus capreolus Carollia perspicillata Castor canadensis Cavia aperea Cavia porcellus Cavia tschudii Cephalorhynchus commersonii Cephalorhynchus hectori hectori Cephalorhynchus hectori maui Ceratotherium simum simum Cervus canadensis Cervus elaphus Chaetophractus villosus Cheirogaleus medius Chinchilla lanigera Chlorocebus sabaeus Choloepus didactylus Choloepus hoffmanni Chrysocyon brachyurus Clethrionomys gapperi Condylura cristata Connochaetes taurinus albojubatus Cricetomys gambianus Cricetulus barabensis Cricetulus griseus Cricetulus longicaudatus Crocidura cyanea Crocuta crocuta Cryptomys hottentotus Ctenomys lewisi Ctenomys opimus Ctenomys steinbachi Cuniculus paca Cyclopes didactylus Cynopterus brachyotis Dasypus novemcinctus Daubentonia madagascariensis Delphinapterus leucas Delphinus delphis Dendrohyrax arboreus Desmodus rotundus Diceros bicornis Didelphis marsupialis Didelphis virginiana Dipus sagitta Dromiciops gliroides Echinops telfairi Eidolon helvum Elephantulus edwardii Elephantulus myurus Elephas maximus Ellobius talpinus Enhydra lutris Eozapus setchuanus Eptesicus fuscus Equus asinus somalicus Equus caballus Equus grevyi Equus quagga Erethizon dorsatum Erinaceus europaeus Eudorcas thomsonii Eulemur albifrons Eulemur coronatus Eulemur flavifrons Eulemur fulvus Eulemur fulvus collaris Eulemur macaco Eulemur mongoz Eulemur rubriventer Eulemur rufus Eulemur sanfordi Eumetopias jubatus Felis catus Fukomys damarensis Galago moholi Galea musteloides Galea musteloides leucoblephara Galeopterus variegatus Gazella leptoceros Georychus capensis Gerbillus cheesmani Gerbillus nanus Giraffa camelopardalis Glaucomys sabrinus Globicephala macrorhynchus Gorilla gorilla Hapalemur griseus Hemicentetes semispinosus Hemiechinus auritus Heterocephalus glaber Hipposideros ruber Hippotragus equinus Hippotragus niger Homo sapiens Hydrochoerus hydrochaeris Hylomys suillus Hystrix cristata Ictidomys tridecemlineatus Jaculus jaculus Kobus megaceros Lagenorhynchus albirostris Lagenorhynchus obliquidens Lasiopodomys brandtii Lasiopodomys gregalis Lasiopodomys mandarinus Lemur catta Leptonycteris yerbabuenae Lepus americanus Lepus californicus Litocranius walleri Loris tardigradus Loxodonta africana Lycaon pictus Lynx rufus Macaca mulatta Macropus fuliginosus Macropus giganteus Macroscelides proboscideus Marmota flaviventris Marmota monax Martes americana Megaptera novaeangliae Meriones libycus Meriones rex Meriones unguiculatus Mesocricetus auratus Mesoplodon bidens Micaelamys namaquensis Microcebus murinus Microgale cowani Microgale drouhardi Microgale thomasi Microtus guentheri Microtus ochrogaster Microtus pennsylvanicus Microtus richardsoni Mirza zaza Molossus molossus Monodelphis domestica Mops pumilus Muntiacus vaginalis Mus minutoides Mus musculus Mustela altaica Mustela frenata Mustela putorius furo Myocastor coypus Myodes rufocanus Myotis brandtii Myotis evotis Myotis lucifugus Myotis myotis Myotis nattereri Myotis thysanodes Myotis vivesi Myotis yumanensis Nanger dama Nanger granti Nanger soemmerringii Nannospalax ehrenbergi Nannospalax galili Napaeozapus insignis Neogale vison Neomys fodiens Neophoca cinerea Neotoma cinerea Nesogale talazaci Neurotrichus gibbsii Notamacropus agilis Notamacropus eugenii Notamacropus rufogriseus Nothocricetulus migratorius Nyctalus noctula Nycticebus coucang Nycticeius humeralis Ochotona alpina Ochotona dauurica Ochotona hyperborea Ochotona pallasi Ochotona princeps Ochotona rufescens Odobenus rosmarus divergens Odocoileus virginianus Okapia johnstoni Ondatra zibethicus Orcinus orca Oreamnos americanus Orientallactaga sibirica Ornithorhynchus anatinus Orycteropus afer Oryctolagus cuniculus Osphranter robustus Osphranter rufus Otolemur crassicaudatus Ovis aries Pan troglodytes Panthera leo Panthera tigris Papio hamadryas Paraechinus aethiopicus Paraechinus hypomelas Parascalops breweri Perodicticus potto Peromyscus californicus Peromyscus eremicus Peromyscus leucopus Peromyscus maniculatus Peromyscus polionotus Phascolarctos cinereus Phoca groenlandica Phoca vitulina Phocoena phocoena Phodopus campbelli Phodopus roborovskii Phyllostomus discolor Phyllostomus hastatus Physeter catodon Pipistrellus pipistrellus Plecotus auritus Pongo pygmaeus Procavia capensis Propithecus coquereli Propithecus diadema Propithecus tattersalli Pteropus giganteus Pteropus hypomelanus Pteropus poliocephalus Pteropus pumilus Pteropus rodricensis Pteropus vampyrus Puma concolor Rattus norvegicus Rattus rattus Rhabdomys pumilio Rhinoceros unicornis Rhinolophus alcyone Rhinolophus ferrumequinum Rhinopoma hardwickii Rhombomys opimus Rhynchonycteris naso Rousettus aegyptiacus Saccopteryx bilineata Sarcophilus harrisii Scalopus aquaticus Scapanus orarius Sciurus carolinensis Sciurus niger Setifer setosus Smutsia temminckii Sorex caecutiens Sorex cinereus Sorex hoyi Sorex isodon Sorex minutissimus Sorex palustris Sorex roboratus Sorex trowbridgii Sorex tundrensis Sorex vagrans Steno bredanensis Suncus murinus Suncus varilla Suricata suricatta Sus scrofa Sus scrofa domesticus Sylvilagus audubonii Sylvilagus bachmani Sylvilagus brasiliensis Sylvilagus floridanus Sylvilagus nuttallii Tachyglossus aculeatus Tadarida brasiliensis Talpa occidentalis Tamandua mexicana Tamandua tetradactyla Tamias amoenus Tamias striatus Tamias townsendii Tamiasciurus douglasii Tamiasciurus hudsonicus Tenrec ecaudatus Tolypeutes matacus Trachypithecus francoisi Tragelaphus angasii Tragelaphus eurycerus Tragelaphus imberbis Tragelaphus oryx Tragelaphus spekii Tragelaphus strepsiceros Trichechus manatus Tupaia belangeri Tupaia gracilis Tupaia longipes Tupaia tana Tursiops aduncus Tursiops truncatus Urocitellus columbianus Ursus americanus Varecia rubra Varecia variegata Vicugna pacos Vombatus ursinus Vulpes vulpes Xanthonycticebus pygmaeus Zalophus californianus Zapus princeps	15043	CSV DOCX IDAT	Steve Horvath	Aug 05, 2023
GSE164462	Transcriptome profiling and Co-expression networks of longissimus dorsi muscle in Gayal（Bos frontalis）and Banna cattle（Bos taurus） with different beef qualities	Expression profiling by high throughput sequencing	Bos frontalis Bos taurus	6	CSV SRA Run Selector	Zehui Wei	Sep 01, 2024
GSE44023	RNA-seq analysis of single bovine blastocysts	Expression profiling by high throughput sequencing	Bos taurus	5	CSV SRA Run Selector	James Lee Chitwood	Feb 03, 2013
GSE55987	The expression pattern of microRNAs in granulosa cells of subordinate and dominant follicles during the early luteal phase of bovine estrous cycle	Non-coding RNA profiling by high throughput sequencing	Bos taurus	12	CSV SRA Run Selector	Dessie Salilew-Wondim	Mar 18, 2015
GSE56002	Differential expression of miRNAs in granulosa cells of bovine preovulatory dominant and subordinate follicles	Non-coding RNA profiling by high throughput sequencing	Bos taurus	6	CSV SRA Run Selector	Samuel Gebremedhn Etay	Mar 18, 2015
GSE67099	Transcriptome analysis of rectal tissues of E. coli O157 super-shedding and E. coli O157 negative cattle	Expression profiling by high throughput sequencing	Bos taurus	9	CSV SRA Run Selector	Guanxiang Liang	Mar 20, 2016
GSE84834	Small RNA sequencing of large dense-core vesicle in bovine chromaffin cells	Non-coding RNA profiling by high throughput sequencing	Bos taurus	3	CSV SRA Run Selector	Yongsoo Park	Jan 01, 2017
GSE91088	DNA methylation analysis of fibroblasts isolated from 5- and 16-month Holstein cows	Methylation profiling by high throughput sequencing	Bos taurus	12	BIGBED CSV TXT SRA Run Selector	Filiz Korkmaz	May 11, 2017
GSE95311	Global gene expression profiles in male and female single bovine blastocysts	Expression profiling by high throughput sequencing	Bos taurus	37	CSV SRA Run Selector	Byungkuk Min	Mar 01, 2017
GSE98736	TRANSCRIPTIONAL ANALYSIS OF MUSCLE FROM CATTLE WITH ALTERNATIVE NCAPG/LCORL GENOTYPES	Expression profiling by high throughput sequencing	Bos taurus	24	CSV TXT SRA Run Selector	Jonathan Beever	Sep 10, 2020
GSE111464	The effect of breed and diet on the liver transcriptome of beef steers divergent in RFI	Expression profiling by high throughput sequencing	Bos taurus	90	CSV SRA Run Selector	Marc Higgins	Jan 16, 2019
GSE121227	Expression profiling reveals differential expressed genes between bovine IVF and SCNT embryos	Expression profiling by high throughput sequencing	Bos taurus	9	CSV SRA Run Selector	rui cheng	Oct 15, 2019
GSE125724	Time course of transcriptional reprogramming in bovine nuclear transfer embryos	Expression profiling by high throughput sequencing	Bos taurus	12	CSV SRA Run Selector	Alexander Graf	May 31, 2021
GSE125828	RNA-Seq analysis of in vitro cultivated bovine fetal fibroblasts (BFF116)	Expression profiling by high throughput sequencing	Bos taurus	3	CSV SRA Run Selector	Alexander Graf	May 31, 2021
GSE126424	Cross-species association of microRNA expression in mammary epithelial cells with stem/progenitor characteristics and cancer susceptibility	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Bos taurus Canis lupus familiaris Equus caballus Homo sapiens Rattus norvegicus Sus scrofa	24	CSV SRA Run Selector	Praveen Sethupathy	Feb 04, 2023
GSE129367	Differential expression profiles of extracellular vesicle-coupled miRNA in follicular fluid of cows at different metabolic status	Non-coding RNA profiling by high throughput sequencing	Bos taurus	13	CSV SRA Run Selector	Tsige Hailay	Sep 23, 2019
GSE131452	Elucidation of the host transcriptomic response to bovine respiratory syncytial virus	Expression profiling by high throughput sequencing	Bos taurus	18	CSV SRA Run Selector	Dayle Johnston	Oct 29, 2019
GSE131607	Genetic mechanisms regulating the host response during mastitis	Expression profiling by high throughput sequencing	Bos taurus	12	CSV SRA Run Selector	Angela Cánovas	Oct 22, 2019
GSE133587	Estrous cycle impacts microRNA content in extracellular vesicles that modulate bovine cumulus cell transcripts during in vitro maturation	Expression profiling by high throughput sequencing	Bos taurus	9	CSV SRA Run Selector	Juliano Coelho da Silveira	Dec 02, 2019
GSE133904	The Right Ventricular Fibroblast Secretome Drives Cardiomyocyte Dedifferentiation	Expression profiling by high throughput sequencing	Bos taurus Rattus norvegicus	12	CSV SRA Run Selector	Philip D Tatman	Jul 07, 2019