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Accession	Title	Series type(s)	Organism(s)	Samples	GDS	Supplementary	Contact	Release date
Filter		Expression profiling by array				BAM
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633		BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE17593	Melanoma short-term cultures and cell lines: expression profiling and CNV analyses	Expression profiling by array Genome variation profiling by SNP array Expression profiling by high throughput sequencing	Homo sapiens	41		BAM CEL	Michael Berger	Feb 01, 2010
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758		BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE27031	The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	24		BAM CEL	Subhashini Sadasivam	Jan 25, 2012
GSE27322	de novo DNA Methylation Balances Hematopoietic Stem Cell Self-Renewal and Differentiation	Methylation profiling by high throughput sequencing Expression profiling by array	Mus musculus	10		BAM BED CEL SRA Run Selector	deqiang sun	Sep 30, 2011
GSE27619	Deep sequencing reveals distinct patterns of DNA methylation and transcript isoform regulation in prostate cancer	Expression profiling by array Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	39		BAM TXT	Jung Kim	May 03, 2011
GSE27970	ChIP-seq analysis reveals distinct H3K27me3 profiles associated with gene regulation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	8		BAM CEL	Matthew Daniel Young	Mar 21, 2011
GSE29899	Long non-coding RNAs regulate adipogenesis	Expression profiling by array Non-coding RNA profiling by high throughput sequencing	Mus musculus	33		BAM CEL	Cole Trapnell	Feb 15, 2013
GSE31407	Drosophila DrosDel deficiency and diploid control flies	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Drosophila melanogaster	203		BAM PAIR SAM	Brian Oliver	Apr 03, 2012
GSE31456	Transcriptional mechanisms controlling direct motor neuron programming	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26		BAM BED BW CEL TXT WIG SRA Run Selector	Shaun Mahony	Jul 04, 2013
GSE31728	Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by array	Homo sapiens	67		BAM TXT	Matthew Iyer	Aug 29, 2011
GSE33634	Topoisomerase II inhibitors and histone eviction	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	62		BAM BED	Baoxu Pang	Jun 04, 2013
GSE34304	Poised RNA Polymerase II changes over developmental time and prepares genes for future expression	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	89		BAM BED CEL	Julia Zeitlinger	Dec 20, 2012
GSE34558	Diverse epigenetic strategies interact to control epidermal differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	14		BAM	Chandra Chilamakuri	Jun 24, 2012
GSE34908	Genetic and epigenetic determinants of neurogenesis and myogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	33		BAM BEDGRAPH CEL MAP	Stephen Tapscott	Mar 26, 2012
GSE35062	Phytochrome Interacting Factors 4 and 5	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	26		BAM BED CEL	Markus Volker Kohnen	May 03, 2012