GEO Browser - GEO

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402 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by array			BED
GSE15726	Chromosomal duplication in the grandifolia-D mutants of Arabidopsis thaliana	Expression profiling by array Genome variation profiling by genome tiling array	Arabidopsis thaliana	13	BAR BED CEL	Nathalie Gonzalez	Jun 02, 2009
GSE22276	Genome-wide maps of histone modifications in Arabidopsis thaliana	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Arabidopsis thaliana	20	BED GPR SRA Run Selector	Misook Ha	Feb 02, 2011
GSE25135	Brassinosteroid (BR) plant hormone signaling	Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Arabidopsis thaliana	10	BAR BED BPMAP CEL TXT	Yu Sun	Dec 31, 2010
GSE28063	LEAFY target genes reveal a link between flower development and biotic stimulus response	Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Arabidopsis thaliana	12	BAR BED CEL	Cara Michele Winter	May 11, 2011
GSE30713	Genome-wide Binding Site Analysis of FAR-RED ELONGATED HYPOCOTYL 3 Reveals Its Novel Function in Arabidopsis Development	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Arabidopsis thaliana	18	BED CEL	Bosheng Li	Dec 31, 2011
GSE35062	Phytochrome Interacting Factors 4 and 5	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	26	BAM BED CEL	Markus Volker Kohnen	May 03, 2012
GSE40520	GTL1 regulates ploidy-dependent cell growth through direct transcriptional repression of APC/CCS52A1 in Arabidopsis	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	7	BAR BED CEL TXT	Kengo Morohashi	Aug 01, 2013
GSE49337	Heterodimerization of GBF1 with HY5 and HYH is crucial for its genome wide binding and target gene regulation	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	11	BAR BED CEL	Sudip Chattopadhyay	Mar 24, 2014
GSE53623	Wide-type, brm, clf, and brm clf mutant seedlings	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Arabidopsis thaliana	24	BED CEL	Lei Gao	Mar 09, 2015
GSE18132	Dynamic O-GlcNAc cycling at promoters of C. elegans genes regulating Longevity, Stress, and Immunity	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Other	Caenorhabditis elegans	72	BAR BED CEL CHP	Michael Krause	Jan 01, 2010
GSE37433	Function, targets and evolution of Caenorhabditis elegans piRNAs	Expression profiling by array Non-coding RNA profiling by high throughput sequencing	Caenorhabditis elegans	16	BED CEL	Leonard Goldstein	Jun 18, 2012
GSE32228	Toward an integrated model of capsule regulation in Cryptococcus neoformans	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Cryptococcus neoformans Cryptococcus neoformans var. neoformans	54	BED CSV CUFF SAM WIG	Brian Clifton Haynes	Dec 10, 2011
GSE27081	Drosophila dKDM5/LID regulates H3K4me3 dynamics at the transcription start site of actively transcribed developmental genes	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	20	BED CEL	David Rossell	Aug 30, 2012
GSE29528	Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Drosophila melanogaster	19	BED BEDGRAPH GPR	Chris W Seidel	Aug 22, 2011
GSE30741	Kc cells from Drosophila melanogaster during ecdysone treatment and CP190 knockdown	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	26	BED PAIR WIG	Ashley M Wood	Oct 14, 2011
GSE32120	The little elongation complex (LEC) regulates small nuclear RNA transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Drosophila melanogaster Mus musculus	22	BED CEL SRA Run Selector	Alexander (Garrett) Garruss	Dec 22, 2011
GSE34304	Poised RNA Polymerase II changes over developmental time and prepares genes for future expression	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	89	BAM BED CEL	Julia Zeitlinger	Dec 20, 2012
GSE36039	Polycomb repressive complex 2-dependent and –independent functions of Jarid2 in transcriptional regulation in Drosophila	Expression profiling by array	Drosophila melanogaster	34	BED CEL	Alexander (Garrett) Garruss	Feb 23, 2012
GSE42106	Cohesin and Polycomb proteins functionally interact to control transcription at silenced, restrained, and active genes	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Drosophila melanogaster	28	BAR BED CEL	Cheri A Schaaf	Apr 25, 2013
GSE44148	Analysis of Drosophila salivary glands and Kc cells with depleted levels of linker histone H1	Expression profiling by array Non-coding RNA profiling by high throughput sequencing	Drosophila melanogaster	14	BED CEL	Sandeep Nagaraj Wontakal	Apr 22, 2013