GEO Browser - GEO

Series

Samples

Platforms

DataSets

63 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by array			BIGWIG
GSE63058	7q11.23 dosage-dependent dysregulation in the human pluripotent state primes aberrant transcriptional programs in disease-relevant lineages	Expression profiling by array Expression profiling by high throughput sequencing Genome variation profiling by SNP array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	139	BIGBED BIGWIG CEL CYCHP	Giuseppe Testa	Dec 15, 2014
GSE66298	A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array	Homo sapiens	136	BIGWIG CEL IDAT TXT	David Soong	Jul 14, 2015
GSE77291	A NOVEL EPIGENETIC SILENCING PATHWAY INVOLVING the HIGHLY CONSERVED 5'-3' EXORIBONUCLEASE Dhp1/Rat1/Xrn2 in SCHIZOSACCHAROMYCES POMBE	Expression profiling by array Other	Schizosaccharomyces pombe	8	BEDGRAPH BIGWIG TXT	Tamas Fischer	Jan 28, 2016
GSE40278	A multiply redundant genetic switch locks in the transcriptional signature of T regulatory cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	64	BED BIGWIG BW CEL WIG	CBDM Lab	Aug 23, 2012
GSE54843	Acute depletion redefines the division of labor among DNA methyltransferases in methylating the human genome	Methylation profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	56	BED BIGWIG CEL TXT	Keith D Robertson	Oct 20, 2014
GSE92654	Aire, guardian of immunological tolerance, binds to and activates super-enhancers	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	51	BIGWIG CEL	CBDM Lab	Jan 22, 2017
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE183619	BAF complex cooperates with c-Myc to orchestrate early fate decisions of CD8 T cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	101	BED BIGWIG CEL TAB	Douglas R Green	Apr 24, 2022
GSE97484	Breast cancer cells treated with a novel KDM5 inhibitor, 5-aza-2' Deoxycytidine, or both.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Methylation profiling by array	Homo sapiens	33	BIGWIG IDAT TXT	Benjamin Leadem	Dec 07, 2017
GSE101949	Cerebellar granular neurons (CGN) and progenitors (CGNP) upon DOT1L inhibition or cKO	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	34	BIGWIG CEL	Patrick Piero Bovio	Oct 15, 2018
GSE134436	Characterization of IL-1α–responsive enhancers and of IL-1α -mediated changes in chromatin topology.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	32	BIGWIG BW TXT	Marek Bartkuhn	Sep 18, 2019
GSE235424	Chronic stress alters hepatic metabolism and thermodynamic respiratory efficiency affecting epigenetics in C57BL/6 mice	Expression profiling by array Methylation profiling by high throughput sequencing	Mus musculus	32	BIGWIG CEL CHP	Birgit Knebel	Mar 11, 2024
GSE51903	Control of 5mC and 5hmC by TET dioxygenases in human embryonic carcinoma cells	Expression profiling by array Methylation profiling by high throughput sequencing	Homo sapiens	22	BED BIGWIG CEL TXT	Keith D Robertson	Jun 14, 2014
GSE42478	Defining a molecular roadmap of cellular reprogramming into iPS cells	Expression profiling by array Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	61	BIGWIG CEL PAIR TXT	Ben S. Wittner	Dec 20, 2012
GSE102035	Dynamic epigenetic remodeling underlies microRNA-mediated transdifferentiation of human adult fibroblasts into neuronal subtypes	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens	42	BIGWIG BW TXT	Matthew James McCoy	Aug 04, 2017
GSE121547	E-C coupling structural protein junctophilin-2 encodes a stress-adaptive transcription regulator	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	25	BIGWIG CEL TXT	Long-Sheng Song	Jan 31, 2019
GSE109696	ERG and FLI1 in endothelial cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	BIGWIG CEL	Nao Nagai	Nov 23, 2018
GSE128978	ERG controls B-cell development by promoting Igh V-to-DJ recombination	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Mus musculus	38	BIGWIG CEL	Bo Porse	Nov 24, 2019
GSE104402	ERα Dependent Alterations in the Epigenetic Landscape of the Mouse Uterus Following Neonatal Estrogen Exposure	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	60	BIGWIG BW TXT	Wendy Jefferson	Mar 27, 2018
GSE183849	Expression data from SETD5-expressing 3T3-L1 cells; ChIP-seq of H3K27ac, H3K4me1, and SETD5 in 3T3-L1 preadipocytes.	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BIGWIG CEL TXT	Yoshihiro Matsumura	Oct 25, 2021