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79 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by array			TSV
GSE124814	Batch-normalization of cerebellar and medulloblastoma gene expression datasets utilizing empirically defined negative control genes	Third-party reanalysis Expression profiling by array	Homo sapiens		TSV XLSX	Holger Weishaupt	Feb 06, 2019
GSE133349	Integrative analysis of competing endogenous RNA networks reveals the functional lncRNAs in Alzheimer’s diseased	Third-party reanalysis Expression profiling by array	Homo sapiens		RDATA TSV	jun Xian Ding	Jun 27, 2019
GSE133605	Transcriptome of tumor biopsy sample of patient with non-small-cell lung adenocarcinoma, ALK rearrangement positive	Third-party reanalysis Expression profiling by array	Homo sapiens	1	TSV	Maria Vladimirovna Suntsova	Jul 02, 2019
GSE205568	A pooled treatment-curated breast cancer gene-expression dataset	Third-party reanalysis Expression profiling by array	Homo sapiens		TSV	Vinu Jose	Mar 09, 2024
GSE99607	Impaired DNA demethylation of C/EBP sites causes premature aging	Other Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	58	BW TAR TSV TXT	Emil Karaulanov	Jun 11, 2018
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	1134	BROADPEAK BW CEL MTX TSV XLS ZIP	Antoni Berenguer-LLergo	Nov 16, 2021
GSE45282	Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo	Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	32	BED CALLS PAIR TSV	Abhinav Nellore	Apr 11, 2013
GSE186064	Dgcr8 function in the anterior second heart field	Non-coding RNA profiling by array Expression profiling by array	Mus musculus synthetic construct	30	CEL TSV TXT	Silvia Elisa Racedo	Oct 01, 2023
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE78844	Pioneering activity of the C-terminal domain of EBF1 shapes the chromatin landscape for B cell programming	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	38	BW TSV TXT	Senthilkumar Ramamoorthy	May 06, 2016
GSE66708	NALP3 inflammasome up-regulation and CASP1 cleavage of the glucocorticoid receptor causes glucocorticoid resistance in leukemia cells	Methylation profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	1144	BED CEL TSV	Steven William Paugh	Mar 24, 2015
GSE17403	Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis	Genome variation profiling by genome tiling array Expression profiling by high throughput sequencing Expression profiling by array	Homo sapiens	60	FA GPR TSV TXT SRA Run Selector	Lauro Sumoy	Jul 18, 2011
GSE30739	Genome-wide binding map of the HIV Tat protein to the human genome	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Homo sapiens	5	TSV TXT	Siavash K Kurdistani	Nov 06, 2011
GSE36795	A role for the nucleoporin Nup170p in chromatin structure and gene silencing	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by array Expression profiling by array	Saccharomyces cerevisiae	14	GFF TSV TXT	Yakun Wan	Feb 28, 2013
GSE42594	cis-Regulation of Shh-directed neural pattering	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	16	BED CEL TSV	Kevin Peterson	Dec 15, 2012
GSE44288	Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	23	TSV TXT WIG	Richard A Young	Feb 13, 2013
GSE52397	C/EBPα poises B cells for rapid reprogramming into iPS cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	48	BED TSV TXT	Bruno Di Stefano	Nov 17, 2013
GSE200910	Synthetic Essentiality of Tryptophan 2,3-dioxygenase 2 in APC-Mutated Colorectal Cancer	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	58	BW CEL TSV	Chang-Jiun Wu	Jul 13, 2022
GSE228968	Phosphorylated nuclear DICER1 promotes open chromatin state and gastric cell fate in lung adenocarcinomas	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Expression profiling by array	Mus musculus	18	BW MTX RCC TSV	Raisa Reyes-Castro	Aug 08, 2023
GSE12045	Expression profiles and ChIP on chip genomewide experiments with dl1500 virus (expressing WT small e1a).	Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Homo sapiens	19	TSV TXT	Siavash K Kurdistani	Aug 26, 2008