Prognostic Gene Expression Signature Associated with Two Molecularly Distinct Subtypes of Colorectal Cancer

Renormalised expression data from 1570 breast cancer related samples

Identification of a stable gene signature of tolerance to renal allograft by meta-analysis.

Defining glioma subtypes based on robust transcriptional patterns from 16 prior studies

Consensus Preprocessing of GEO and ArrayExpress Normal and Diseased Lung Tissue Microarray Data

Human gene expression compendium containing 9395 samples from the HG_U133PlusV2 platform

Construction of prostate cancer cell line (PC-3)-specific interactome

Integrating tumor and stromal gene expression signatures with clinical indices for survival stratification of early-stage non-small cell lung cancer

L1000 Connectivity Map perturbational profiles from Broad Institute LINCS Center for Transcriptomics LINCS PHASE *II* (n=354,123; updated March 30, 2017)

Comparative genomics analysis of mononuclear phagocyte subsets confirms similarity between lymphoid tissue-resident and dermal XCR1+ DCs in mouse and human and distinguishes them from Langerhans cells.

Implications of CpG islands on chromosomal architectures and modes of global gene regulation

Pre-symptomatic diagnosis of Ebola virus infection

Microenvironment Cell Populations Affymetrix HuGene 1.0ST

Microenvironment Cell Populations Affymetrix 133 Plus 2.0 series

Microenvironment Cell Populations Affymetrix 133 A

Microenvironment Cell Populations

L1000 Connectivity Map perturbational profiles from Broad Institute LINCS Center for Transcriptomics LINCS Pilot PHASE I (n=1,319,138; updated March 03, 2017)

Broad Institute L1000 Connectivity Map and RNAseq gene expression profiles on tissue samples from the GTEx project

Perturbational proteomic and transcriptional profiles of drug perturbations from Broad Institute LINCS Proteomic Characterization Center for Signaling and Epigenetics and Broad Institute LINCS Center for Transcriptomics (U54HG008097) (n=5,063)

Datasets Used in Evaluation Of RNAi And CRISPR Technologies By Large Scale Gene Expression Profiling In The Connectivity Map