GEO Browser - GEO

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200 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by high throughput sequencing			SRA Run Selector
GSE16344	Expression in Aneuploid Drosophila S2 Cells	Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by array Expression profiling by array	Drosophila melanogaster	38	FTR GPR TXT SRA Run Selector	Brian Oliver	Jan 11, 2010
GSE18679	TimEX from human embryonic stem cells, mesenchymal stem cells, and erythroid cells	Genome variation profiling by genome tiling array Genome variation profiling by high throughput sequencing Expression profiling by array	Homo sapiens	27	CEL PAIR TXT SRA Run Selector	Eric Bouhassira	Nov 04, 2009
GSE19956	CNV S2-DRSC Cells	Genome variation profiling by high throughput sequencing	Drosophila melanogaster	2	WIG SRA Run Selector	DCC modENCODE	Jan 21, 2010
GSE19957	CNV Kc-167 Cells	Genome variation profiling by high throughput sequencing	Drosophila melanogaster	2	WIG SRA Run Selector	DCC modENCODE	Jan 21, 2010
GSE19958	CNV ML-DmBG3-c2 Cells	Genome variation profiling by high throughput sequencing	Drosophila melanogaster	2	WIG SRA Run Selector	DCC modENCODE	Jan 21, 2010
GSE19986	U87MG Decoded: The Genomic Sequence of a Cytogenetically Aberrant Human Cancer Cell Line	SNP genotyping by SNP array Genome variation profiling by SNP array Genome variation profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Stanley F Nelson	Jan 25, 2010
GSE21159	DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing	Genome variation profiling by high throughput sequencing	Homo sapiens	3	TXT SRA Run Selector	John Castle	Apr 02, 2010
GSE22024	Next Gen(etics): targeted genome enrichment and next-generation sequencing enhances phenotype-driven forward genetics and gene-driven reverse genetics	Genome variation profiling by high throughput sequencing	Rattus norvegicus	30	BEDGRAPH SAM TXT SRA Run Selector	Michal Mokry	Sep 13, 2010
GSE22411	Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Arabidopsis thaliana	12	TXT SRA Run Selector	Hume Stroud	Jul 21, 2010
GSE22657	High-throughput semi-quantitative analysis of insertional mutations in heterogeneous tumors	Genome variation profiling by high throughput sequencing	Mus musculus	453	BED TXT SRA Run Selector	Jos Jonkers	Aug 12, 2011
GSE23666	Highly Aneuploid Zebrafish Malignant Peripheral Nerve Sheath Tumors have Genetic Alterations Similar to Human Cancers	Genome variation profiling by array Genome variation profiling by high throughput sequencing	Danio rerio	48	TXT SRA Run Selector	Sebastian Hoersch	Sep 08, 2010
GSE26664	DNA sequencing of selected Globobulimina pseudospinescens organisms	Genome variation profiling by high throughput sequencing	Globobulimina pseudospinescens	1	FASTA SRA Run Selector	H.G. Stunnenberg	Jun 20, 2011
GSE26757	Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Medicago sativa	6	FASTA TXT SRA Run Selector	Sam Yang	Apr 21, 2011
GSE26954	Comprehensive Long Span Paired-End-Tag Mapping Reveals Characteristic Patterns of Structural Variations in Epithelial Cancer Genomes	Genome variation profiling by high throughput sequencing	Homo sapiens	24	GFF TXT SRA Run Selector	Axel HILLMER	Apr 06, 2011
GSE28136	CNV CME W1 Cl.8+ Cells	Genome variation profiling by high throughput sequencing	Drosophila melanogaster	2	WIG SRA Run Selector	DCC modENCODE	Mar 23, 2011
GSE28303	An East-Asian polymorphism underlies BCR-ABL mutation-independent resistance to tyrosine kinase inhibitors in chronic myelogenous leukemia	Genome variation profiling by high throughput sequencing	Homo sapiens	6	GFF TXT SRA Run Selector	Axel HILLMER	Feb 27, 2012
GSE29509	The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA.	Genome variation profiling by high throughput sequencing	Mus musculus	28	WIG SRA Run Selector	Erik Splinter	Jun 24, 2011
GSE30833	Genome Sequencing of Gastric Cancer Reveals Diverse Mutational and Pathogen Signatures	Genome variation profiling by high throughput sequencing	Homo sapiens	8	BAM GFF TXT SRA Run Selector	Axel HILLMER	Dec 05, 2012
GSE31388	Variation in chromatin accessibility is a key determinant of heritable variation in gene expression	Genome variation profiling by high throughput sequencing	Homo sapiens	70	BED PDF TXT SRA Run Selector	Jacob F Degner	Jan 26, 2012
GSE31550	DNA-Seq of DrosDel deficiency lines and w1118 lines	Genome variation profiling by high throughput sequencing	Drosophila melanogaster	44	BAM SRA Run Selector	Brian Oliver	Apr 03, 2012