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200 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by high throughput sequencing			SRA Run Selector
GSE145716	Beyond flowering time: diverse roles of an APETALA2‐like transcription factor in shoot architecture and perennial traits	Genome variation profiling by high throughput sequencing	Arabis alpina	2	XLSX SRA Run Selector	Maria Albani	Jan 26, 2021
GSE87585	3D genome of multiple myeloma reveals spatial genome disorganization associated with copy number variations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	12	FPKM_TRACKING TAR TXT SRA Run Selector	Cheng Li	Nov 17, 2017
GSE165765	A Dinucleotide-barcode reporter system and application in dissecting the causal rule of regulatory risk SNPs	Genome variation profiling by high throughput sequencing	Homo sapiens synthetic construct	11	TXT SRA Run Selector	Qilai Huang	Jan 30, 2021
GSE178992	A Stk4 -Foxp3-P65 Transcriptional Complex Promotes Treg Cell Activation and Homeostasis	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	13	VCF XLSX SRA Run Selector	KLaus Schmitz-Abe	Sep 01, 2021
GSE188594	A chemical-induced reversible gene knockout system for studying gene function in situ [AMP-seq]	Genome variation profiling by high throughput sequencing	Homo sapiens	9	TXT SRA Run Selector	Shixue Gou	Nov 13, 2021
GSE84430	A germline mutation of CDKN2A and a novel RPLP1-C19MC fusion detected in a rare melanotic neuroectodermal tumor of infancy: a case report [Seq]	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	3	TXT VCF SRA Run Selector	Bass Hassan	Aug 29, 2016
GSE166712	A knockout mutation associated with juvenile paroxysmal dyskinesia in Markiesje dogs indicates SOD1 pleiotropy	Genome variation profiling by high throughput sequencing	Canis lupus familiaris	5	VCF SRA Run Selector	Frank van Steenbeek	Mar 12, 2021
GSE180164	A regulatory phosphosite on Mec1 controls RNAPII and RNAPIII occupancy during replication stress [copy_number]	Genome variation profiling by high throughput sequencing	Saccharomyces cerevisiae	4	BW SRA Run Selector	romain forey	Sep 08, 2021
GSE175931	A transcriptional repressor programs gametocytogenesis in human malaria parasites (PfAP2-G5) [WGS-Seq]	Genome variation profiling by high throughput sequencing	Plasmodium falciparum	4	XLSX SRA Run Selector	Shijun Shen	Aug 03, 2021
GSE95013	AICDA-induced epigenetic plasticity accelerates germinal center-derived lymphomagenesis	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	88	TXT SRA Run Selector	Matt Teater	Jan 19, 2018
GSE131977	Acquired resistance to combined BET and CDK4/6 inhibition in triple-negative breast cancer [Barcode]	Genome variation profiling by high throughput sequencing	Homo sapiens	174	TSV SRA Run Selector	Kornelia Polyak	Apr 08, 2020
GSE131980	Acquired resistance to combined BET and CDK4/6 inhibition in triple-negative breast cancer [Exome]	Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	23	XLSX SRA Run Selector	Kornelia Polyak	Apr 08, 2020
GSE66135	Allele-selective Transcriptome Recruitment to Polysomes Primed for Translation: Protein-coding and Noncoding RNAs, and RNA Isoforms	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens	6	TXT SRA Run Selector	Amy Hite	Jun 30, 2015
GSE165330	Amniotes co-opt intrinsic genetic instability to protect germ-line genome integrity	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Gallus gallus	123	BIGWIG CSV SF TXT SRA Run Selector	Jiafei Shen	Jan 24, 2023
GSE28303	An East-Asian polymorphism underlies BCR-ABL mutation-independent resistance to tyrosine kinase inhibitors in chronic myelogenous leukemia	Genome variation profiling by high throughput sequencing	Homo sapiens	6	GFF TXT SRA Run Selector	Axel HILLMER	Feb 27, 2012
GSE121111	Approaches for Surveying Cosmic Radiation Damage in Large Populations of Arabidopsis thaliana Seeds- an Antarctic Example	Genome variation profiling by high throughput sequencing	Arabidopsis thaliana	5	BEDPE SRA Run Selector	Robert J. Ferl	Dec 20, 2018
GSE36203	Architectural protein subclasses shape 3-D organization of genomes during lineage commitment	Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED TXT SRA Run Selector	Jennifer Elizabeth Phillips-Cremins	May 24, 2013
GSE77710	Both maternally and paternally imprinted genes regulate seed development in rice	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Oryza sativa	14	TXT SRA Run Selector	Jingya Yuan	Feb 04, 2017
GSE28136	CNV CME W1 Cl.8+ Cells	Genome variation profiling by high throughput sequencing	Drosophila melanogaster	2	WIG SRA Run Selector	DCC modENCODE	Mar 23, 2011
GSE19957	CNV Kc-167 Cells	Genome variation profiling by high throughput sequencing	Drosophila melanogaster	2	WIG SRA Run Selector	DCC modENCODE	Jan 21, 2010