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92 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by high throughput sequencing	Mus musculus
GSE29509	The inactive X chromosome adopts a unique three-dimensional conformation that is dependent on Xist RNA.	Genome variation profiling by high throughput sequencing	Mus musculus	28	WIG SRA Run Selector	Erik Splinter	Jun 24, 2011
GSE22657	High-throughput semi-quantitative analysis of insertional mutations in heterogeneous tumors	Genome variation profiling by high throughput sequencing	Mus musculus	453	BED TXT SRA Run Selector	Jos Jonkers	Aug 12, 2011
GSE29184	A draft map of cis-regulatory sequences in the mouse genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	143	BAM BIGWIG BOWTIE TXT	Bing Ren	Jul 01, 2012
GSE36203	Architectural protein subclasses shape 3-D organization of genomes during lineage commitment	Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED TXT SRA Run Selector	Jennifer Elizabeth Phillips-Cremins	May 24, 2013
GSE46210	Clonal expansion analysis of transposon insertions by high-throughput sequencing identifies candidate cancer genes in a PiggyBac mutagenesis screen	Genome variation profiling by high throughput sequencing	Mus musculus	34	BEDGRAPH SRA Run Selector	Caroline Friedel	Aug 28, 2013
GSE48493	Supression of genetic recombination in the pseudoautosomal region and at subtelomeres in mice with a hypomorphic spo11 allele	Genome variation profiling by high throughput sequencing Other	Mus musculus	9	BED BEDGRAPH SRA Run Selector	Kevin Brick	Sep 11, 2013
GSE53755	Long-range joining of intra-chromosomal DNA double-strand breaks	Genome variation profiling by high throughput sequencing	Mus musculus	13	TXT SRA Run Selector	Frederick Alt	Jan 03, 2014
GSE62952	Integrated genome and transcriptome sequencing from the same cell	Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	20	CSV TXT SRA Run Selector	Lennart Kester	Dec 11, 2014
GSE68644	Extrachromosomal DNA (microDNA) in Human, Mouse and Chicken	Genome variation profiling by high throughput sequencing	Gallus gallus Homo sapiens Mus musculus	24	TXT SRA Run Selector	Anindya Dutta	May 08, 2015
GSE57233	The Prion Protein (PrP) is involved in translation via RNA granule-like mRNPs, a connection which is impaired during neurodegenerative diseases	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	16	TXT XLS SRA Run Selector	Clemens Krost	Nov 01, 2015
GSE73833	Humanized PRDM9 Mouse Testis H3K4me3 and DMC1 ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Third-party reanalysis	Mus musculus	18	TXT VCF SRA Run Selector	Nicolas Altemose	Feb 02, 2016
GSE73128	Mutations in histone and other genes in MLL2-impaired human and mouse cells	Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	24	SRA Run Selector	Theo Kantidakis	Apr 13, 2016
GSE73130	Mutation of cancer driver MLL2 results in transcription stress and genome instability	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	62	BED RPKM	Theo Kantidakis	Apr 13, 2016
GSE87424	Enhancer Remodeling During Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacological Targeting of the P-TEFb Complex	Methylation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	167	BED CSV IDAT TXT XLSX	Gary L Johnson	Jan 20, 2017
GSE64881	Genome Wide Characterization of Genome Organization in Mouse ES cells	Genome variation profiling by high throughput sequencing Other	Mus musculus other sequences	477	TXT SRA Run Selector	Robert A Beagrie	Mar 08, 2017
GSE92950	Whole genome sequencing of murine derived intestinal tumour organoids	Genome variation profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Robert Piskol	Mar 29, 2017
GSE92966	The role of Lgr5 intestinal cancer stem cells in tumour initiation, progression and metastasis	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing Other	Mus musculus	48	TSV TXT VCF	Robert Piskol	Mar 29, 2017
GSE89739	Array comparative genomic hybridization of tumor tissue developed in TH-MYCN (hemizygote) mice [Agilent-015028]	Genome variation profiling by high throughput sequencing	Mus musculus	11	TXT	Shoma Tsubota	Apr 01, 2017
GSE89741	Array comparative genomic hybridization of tissue developed in TH-MYCN (hemizygote) mice	Genome variation profiling by high throughput sequencing	Mus musculus	33	TXT	Shoma Tsubota	Apr 01, 2017
GSE100808	Distinct cellular mechanisms underlie anti-CTLA-4 and anti-PD-1 checkpoint blockade [WES]	Genome variation profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Spencer Wei	Aug 10, 2017