GEO Browser - GEO

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55 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome variation profiling by high throughput sequencing	Mus musculus		SRA Run Selector
GSE178992	A Stk4 -Foxp3-P65 Transcriptional Complex Promotes Treg Cell Activation and Homeostasis	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	13	VCF XLSX SRA Run Selector	KLaus Schmitz-Abe	Sep 01, 2021
GSE95013	AICDA-induced epigenetic plasticity accelerates germinal center-derived lymphomagenesis	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	88	TXT SRA Run Selector	Matt Teater	Jan 19, 2018
GSE131980	Acquired resistance to combined BET and CDK4/6 inhibition in triple-negative breast cancer [Exome]	Genome variation profiling by high throughput sequencing	Homo sapiens Mus musculus	23	XLSX SRA Run Selector	Kornelia Polyak	Apr 08, 2020
GSE36203	Architectural protein subclasses shape 3-D organization of genomes during lineage commitment	Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED TXT SRA Run Selector	Jennifer Elizabeth Phillips-Cremins	May 24, 2013
GSE130263	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching [3C-HTGTS]	Genome variation profiling by high throughput sequencing	Mus musculus	75	BEDGRAPH SRA Run Selector	Frederick W Alt	Sep 25, 2019
GSE130265	Chromatin Loop Extrusion Plays a Fundamental Mechanistic Role in Antibody Class Switching [CSR-HTGTS-Seq]	Genome variation profiling by high throughput sequencing	Mus musculus	21	TXT SRA Run Selector	Frederick W Alt	Sep 25, 2019
GSE46210	Clonal expansion analysis of transposon insertions by high-throughput sequencing identifies candidate cancer genes in a PiggyBac mutagenesis screen	Genome variation profiling by high throughput sequencing	Mus musculus	34	BEDGRAPH SRA Run Selector	Caroline Friedel	Aug 28, 2013
GSE171127	Comparative parallel meta-analysis of cells undergoing reprogramming to pluripotency and trophectoderm states	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	184	BETA BIGWIG MTX TSV TXT SRA Run Selector	Tommy Kaplan	Apr 28, 2022
GSE157358	Compare re-expression of PAX2 in PTENshRNA cells to PTENshRNA cells alone	Genome variation profiling by high throughput sequencing	Mus musculus	6	TXT SRA Run Selector	Joanna Burdette	Apr 05, 2021
GSE125326	Crossovers from B6xCAST F1 PRDM9-Humanized/CAST testes	Genome variation profiling by high throughput sequencing	Mus musculus	219	TXT SRA Run Selector	Anjali Gupta Hinch	Mar 18, 2019
GSE147069	DDX3X suppresses neural lineage susceptibility to medulloblastoma [DNA-Seq]	Genome variation profiling by high throughput sequencing	Mus musculus	13	TXT SRA Run Selector	Richard Gilbertson	Mar 19, 2020
GSE181154	Detection of duplication mutations in coding regions in normal lung and lung tumor in wild-type (WT) and FEN1 A159V mutant mice	Genome variation profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	wei chen	Nov 01, 2021
GSE131366	Distinct Contribution of DNA Methylation and Histone Acetylation to the Genomic Occupancy of Transcription Factors	Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	126	BW TXT SRA Run Selector	Skirmantas Kriaucionis	Aug 06, 2020
GSE100808	Distinct cellular mechanisms underlie anti-CTLA-4 and anti-PD-1 checkpoint blockade [WES]	Genome variation profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Spencer Wei	Aug 10, 2017
GSE130539	Distruption of TOX and TOX2 transcription factors in CAR T cells limits T cell exhaustion [ATAC-Seq]	Genome variation profiling by high throughput sequencing	Mus musculus	4	BED SRA Run Selector	Anjana Rao	May 31, 2019
GSE131920	Exome sequencing identified mutations in clpex mouse mutants	Genome variation profiling by high throughput sequencing	Mus musculus	3	VCF XLSX SRA Run Selector	Rolf Stottmann	May 30, 2019
GSE137179	Exome sequencing of thymus transplantation based spontaneous murine T cell acute lymphoblastic leukemia (T-ALL) model	Genome variation profiling by high throughput sequencing	Mus musculus	19	TXT SRA Run Selector	Qi Zhao	Sep 10, 2019
GSE68644	Extrachromosomal DNA (microDNA) in Human, Mouse and Chicken	Genome variation profiling by high throughput sequencing	Gallus gallus Homo sapiens Mus musculus	24	TXT SRA Run Selector	Anindya Dutta	May 08, 2015
GSE159253	Genetically defined syngeneic mouse models of ovarian cancer as tools for the discovery of combination immunotherapy (Exome)	Genome variation profiling by high throughput sequencing	Mus musculus	3	VCF SRA Run Selector	Sonia Iyer	Nov 17, 2020
GSE64881	Genome Wide Characterization of Genome Organization in Mouse ES cells	Genome variation profiling by high throughput sequencing Other	Mus musculus other sequences	477	TXT SRA Run Selector	Robert A Beagrie	Mar 08, 2017