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779 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by genome tiling array			TXT
GSE5974	Interdependence between DNA methylation and transcription	Expression profiling by genome tiling array Genome binding/occupancy profiling by genome tiling array Methylation profiling by array	Arabidopsis thaliana	5	GFF TXT	Jorja Henikoff	Nov 26, 2006
GSE10877	Highly integrated single base resolution maps of the epigenome in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Methylation profiling by array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	16	CEL TXT	Joseph R Ecker	Apr 21, 2008
GSE10969	Highly integrated epigenome maps in Arabidopsis - methylcytosine immunoprecipitation	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	CEL TXT	Joseph R Ecker	Apr 21, 2008
GSE12383	Genome wide profiling of H3K9me2 in Arabidopsis thaliana	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	TXT	Steve E Jacobsen	Sep 11, 2008
GSE14450	Genome-wide direct targets of PIL5 (ChIP-chip analysis of PIL5)	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	3	TXT	Giltsu Choi	Jan 12, 2010
GSE15597	Epigenetic Control of Light-Regulated Gene Expression in Arabidopsis	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	40	CEL TXT	Hang He	Dec 30, 2009
GSE19763	Genome-wide FLP/MYB88 binding sites in Arabidopsis thaliana	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	12	CEL TXT	Zidian Xie	Sep 01, 2010
GSE21338	Genome-wide Identification of SHR Direct Targets Using a Custom Agilent Promoter Array	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	2	TXT	Hongchang Cui	Jul 19, 2010
GSE21625	The novel transcription factor, POPEYE, regulates response to iron deficiency in Arabidopsis roots	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	TXT	Wolfgang Busch	Nov 22, 2010
GSE21673	Relationship between nucleosome positioning and DNA methylation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana Homo sapiens	6	CEL TXT	matteo Pellegrini	May 29, 2010
GSE21741	Transcriptional regulation of ROS controls the transition from proliferation to differentiation in the root	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	TXT	Wolfgang Busch	Nov 12, 2010
GSE21828	Mapping origins of replication in Arabidopsis thaliana	Other Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	5	BAR BED CEL TXT	Hume Stroud	Feb 06, 2011
GSE21928	Mapping replication-initiation proteins ORC1 and CDC6 in Arabidopsis thaliana	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	2	CEL TXT	Juan Carlos Oliveros	Feb 06, 2011
GSE23774	Genome wide BZR1 binding site analysis in Arabidopsis	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	1	BAR BED BPMAP CEL TXT	Yu Sun	Dec 31, 2010
GSE24507	Gene expression and H3K27 tri-methylation analysis of meristematic tissue (Me) and young leaves (Le) isolated by manual dissection of clv3-9 plants	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	8	GFF PAIR TXT	Daniel Schubert	Apr 20, 2011
GSE24684	Genome-wide mapping of BES1 binding sites in Arabidopsis thaliana	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	6	BAR CEL TXT	Xiaofei Yu	Jan 02, 2011
GSE24973	Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulations: ChIP-Chip	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	12	CEL TXT	Hang He	Dec 31, 2010
GSE24974	Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	14	CEL TXT	Hang He	Dec 31, 2010
GSE25135	Brassinosteroid (BR) plant hormone signaling	Genome binding/occupancy profiling by genome tiling array Expression profiling by array	Arabidopsis thaliana	10	BAR BED BPMAP CEL TXT	Yu Sun	Dec 31, 2010
GSE30104	Genome-wide identification of SCARECROW (SCR) direct targets using a custom Agilent promoter array	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	TXT	Anjali S Iyer-Pascuzzi	Nov 23, 2011