GEO Browser - GEO

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124 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana
GSE24474	H3K27 tri-methylation analysis of meristematic tissue (Me) and young leaves (Le) isolated by manual dissection of clv3-9 plants	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	XLSX PAIR GFF	Daniel Schubert	Mar 21, 2011
GSE37075	Loss of the DNA methyltransferase MET1 induces H3K9 hypermethylation at PcG target genes in Arabidopsis, and relocation of H3K27 trimethylation to transposons	Genome binding/occupancy profiling by genome tiling array Expression profiling by high throughput sequencing	Arabidopsis thaliana	8	WIG PAIR	Hume Stroud	Mar 02, 2013
GSE5974	Interdependence between DNA methylation and transcription	Expression profiling by genome tiling array Genome binding/occupancy profiling by genome tiling array Methylation profiling by array	Arabidopsis thaliana	5	TXT GFF	Jorja Henikoff	Nov 26, 2006
GSE10877	Highly integrated single base resolution maps of the epigenome in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array Methylation profiling by array Methylation profiling by high throughput sequencing	Arabidopsis thaliana	16	TXT CEL	Joseph R Ecker	Apr 21, 2008
GSE10969	Highly integrated epigenome maps in Arabidopsis - methylcytosine immunoprecipitation	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	TXT CEL	Joseph R Ecker	Apr 21, 2008
GSE12383	Genome wide profiling of H3K9me2 in Arabidopsis thaliana	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	TXT	Steve E Jacobsen	Sep 11, 2008
GSE14450	Genome-wide direct targets of PIL5 (ChIP-chip analysis of PIL5)	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	3	TXT	Giltsu Choi	Jan 12, 2010
GSE15597	Epigenetic Control of Light-Regulated Gene Expression in Arabidopsis	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	40	TXT CEL	Hang He	Dec 30, 2009
GSE19763	Genome-wide FLP/MYB88 binding sites in Arabidopsis thaliana	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	12	TXT CEL	Zidian Xie	Sep 01, 2010
GSE21338	Genome-wide Identification of SHR Direct Targets Using a Custom Agilent Promoter Array	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	2	TXT	Hongchang Cui	Jul 19, 2010
GSE21625	The novel transcription factor, POPEYE, regulates response to iron deficiency in Arabidopsis roots	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	TXT	Wolfgang Busch	Nov 22, 2010
GSE21673	Relationship between nucleosome positioning and DNA methylation	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana Homo sapiens	6	TXT CEL	matteo Pellegrini	May 29, 2010
GSE21741	Transcriptional regulation of ROS controls the transition from proliferation to differentiation in the root	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	4	TXT	Wolfgang Busch	Nov 12, 2010
GSE21828	Mapping origins of replication in Arabidopsis thaliana	Other Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	5	TXT CEL BED BAR	Hume Stroud	Feb 06, 2011
GSE21928	Mapping replication-initiation proteins ORC1 and CDC6 in Arabidopsis thaliana	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	2	TXT CEL	Juan Carlos Oliveros	Feb 06, 2011
GSE23774	Genome wide BZR1 binding site analysis in Arabidopsis	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	1	TXT CEL BPMAP BED BAR	Yu Sun	Dec 31, 2010
GSE24507	Gene expression and H3K27 tri-methylation analysis of meristematic tissue (Me) and young leaves (Le) isolated by manual dissection of clv3-9 plants	Expression profiling by array Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	8	TXT PAIR GFF	Daniel Schubert	Apr 20, 2011
GSE24684	Genome-wide mapping of BES1 binding sites in Arabidopsis thaliana	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	6	TXT CEL BAR	Xiaofei Yu	Jan 02, 2011
GSE24973	Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulations: ChIP-Chip	Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	12	TXT CEL	Hang He	Dec 31, 2010
GSE24974	Genome-wide mapping of the HY5-mediated gene networks in Arabidopsis that involve both transcriptional and post-transcriptional regulations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Arabidopsis thaliana	14	TXT CEL	Hang He	Dec 31, 2010