GEO Browser - GEO

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37 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing					Dec 01, 2023
GSE247991	Disruption of H3K36 methylation provokes cellular plasticity to drive aberrant glandular formation and squamous carcinogenesis (CUT&RUN)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	XLSX	Brian C. Capell	Dec 01, 2023
GSE178751	Distinct epicardial gene regulatory programmes drive development and regeneration of the zebrafish heart	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	25	TXT SRA Run Selector	Paul Richard Riley	Dec 01, 2023
GSE197214	ATACseq analysis of granulocyte-monocyte progenitor cells (GMPs) with GFI1 wildtype and low level of GFI1 expression	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TXT	Pradeep Kumar Patnana	Dec 01, 2023
GSE207068	Transcriptome and chromatin changes during CRC organoid outgrowth as proxy for metastatic outgrowth [bulkATACseq_AKPS]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	21	TXT	Maria Christine Heinz	Dec 01, 2023
GSE207071	Transcriptome and chromatin changes during CRC organoid outgrowth as proxy for metastatic outgrowth	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	53	TXT	Maria Christine Heinz	Dec 01, 2023
GSE224196	Cis and Trans Gene Transcription Regulatory Mechanisms Underpin Variation of a Maize Agronomic Trait	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Zea mays	46	TXT BED	Erich Grotewold	Dec 01, 2023
GSE225654	Integrating into dairy goats chromatin accessible sites during lactation promotes transgene expression efficiency	Genome binding/occupancy profiling by high throughput sequencing	Capra hircus	6	TXT BW	Zhenliang Zhu	Dec 01, 2023
GSE240522	The epigenetic landscape of oligodendrocyte progenitors changes with time	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	TXT NARROWPEAK BW	Patrizia Casaccia	Dec 01, 2023
GSE248565	Genome-wide binding of TbsP (HVO_2861) in Haloferax volcanii [CHIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Haloferax volcanii DS2	24	TXT BEDGRAPH	Amy Schmid	Dec 01, 2023
GSE248566	Transciptome profile of TrmB and TbsP, Genome-wide binding of TbsP (HVO_2861) in Haloferax volcanii	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Haloferax volcanii DS2	63	TXT BEDGRAPH	Amy Schmid	Dec 01, 2023
GSE248645	Reanalysis of ChIP-Seq of GSE117155.	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TXT	Parmit Kumar Singh	Dec 01, 2023
GSE248857	Transcriptomic Analysis Identifies B-Lymphocyte Kinase as a Therapeutic Target for Desmoplastic Small Round Cell Tumor Cancer Stem Cell-Like Cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	18	TXT NARROWPEAK	Sean Bong Lee	Dec 01, 2023
GSE169582	RPB1 ChIP-Seq of NSC from Wild Type (WT) and Armc5 knockout mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TSV CSV BW SRA Run Selector	Jiangping Wu	Dec 01, 2023
GSE230389	Single cell data from IDH mutant astroxytoma and IDH wildtype GBM tumor specimen	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TSV TBI MTX	Niklas Ravn-Boess	Dec 01, 2023
GSE213768	ATACSeq of TET2-mutant human neutrophils	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	NARROWPEAK BIGWIG	Dominique Bonnet	Dec 01, 2023
GSE213771	ATAC-seq, RNA-seq and RRBS of TET2-mutant human neutrophils	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	20	NARROWPEAK BIGWIG	Dominique Bonnet	Dec 01, 2023
GSE247821	A functional genomics process for systematic dissection and mutation-specific target discovery in breast cancer PIK3CA hotspot mutations [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	NARROWPEAK	Adam Xavier Miranda	Dec 01, 2023
GSE248758	Transcriptomic Analysis Identifies B-Lymphocyte Kinase as a Therapeutic Target for Desmoplastic Small Round Cell Tumor Cancer Stem Cell-Like Cells [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	NARROWPEAK	Sean Bong Lee	Dec 01, 2023
GSE218216	Mouse lung and brain LCM-ATACseq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	CSV	Joachim Schultze	Dec 01, 2023
GSE236598	BET bromodomain Inhibition Potentiates Radiosensitivity by Reprograming DNA Damage Repair in H3K27M-Mutant Glioma	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	17	CSV BIGWIG	Rintaro Hashizume	Dec 01, 2023