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40499 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing
GSE222454	Multimodal profiling reveals site-specific adaptation and tissue residency hallmarks of γδ T cells across organs in mice	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	CSV H5 MTX TSV	Sagar -	Nov 05, 2023
GSE40629	Differential transcript isoform usage pre- and post-zygotic genome activation in zebrafish	Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	2	TDF SRA Run Selector	Håvard Aanes	Nov 01, 2012
GSE237827	Flexible and scalable control of T cell memory by a reversible epigenetic switch (ATAC-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW TXT	Kathleen Abadie	Jul 25, 2023
GSE237830	Flexible and scalable control of T cell memory by a reversible epigenetic switch	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	BW H5 MTX TSV TXT	Kathleen Abadie	Jul 25, 2023
GSE155229	Genome-wide analysis of enhancers repressed by Nkx2.2 in spinal motor neuron progenitors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	TXT SRA Run Selector	Elena Abarinov	Jul 24, 2023
GSE226345	Global profiling of Nkx2.2 SD-domain mutant pancreas during development and adulthood compared to transcriptional profiling of SD-domain mutant expressing neural progenitors.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	27	TXT	Elena Abarinov	Feb 21, 2024
GSE215919	Inter- and trans-generational impact of H3K4 methylation in neuronal homeostasis (ChiP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	28	BIGWIG	Steffen Abay-Nørgaard	May 23, 2023
GSE215921	Inter- and trans-generational impact of H3K4 methylation in neuronal homeostasis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	86	BIGWIG TXT	Steffen Abay-Nørgaard	May 23, 2023
GSE141844	PDGFRA Defines the Mesenchymal Stem Cell Kaposi’s Sarcoma Progenitors by Enabling KSHV Oncogenesis in an Angiogenic Environment [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BW SRA Run Selector	Martin Carlos Abba	Dec 12, 2019
GSE141868	PDGFRA Defines the Mesenchymal Stem Cell Kaposi’s Sarcoma Progenitors by Enabling KSHV Oncogenesis in an Angiogenic Environment	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30		Martin Carlos Abba	Dec 12, 2019
GSE124657	PTEN modulates gene transcription by redistributing genome-wide RNA polymerase II occupancy [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BIGWIG SRA Run Selector	Ata Abbas	Jun 04, 2019
GSE124659	PTEN modulates gene transcription by redistributing genome-wide RNA polymerase II occupancy	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	26		Ata Abbas	Jun 04, 2019
GSE152559	PTEN-dependent regulation of genome-wide transcription during metabolic stress [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	BW SRA Run Selector	Ata Abbas	Sep 04, 2020
GSE152602	PTEN-dependent regulation of genome-wide transcription during metabolic stress	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	24		Ata Abbas	Sep 04, 2020
GSE169115	Epigenetic reprogramming mediated by maternal diet rich in omega-3 fatty acids protects from breast cancer development in F1 offspring	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW SRA Run Selector	Ata Abbas	May 28, 2021
GSE115294	Genome-wide mapping of Yap1 in the normal and hypertrophied hearts	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BW XLSX SRA Run Selector	Maha Abdellatif	Jun 05, 2018
GSE119391	ACAA2 and OGDH bind to H2A.Z-occupied transcription start sites	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW SRA Run Selector	Maha Abdellatif	Sep 01, 2019
GSE165271	H3K9-butyryl (H3K9Bu) and H3K9-acetyi (H3K9ac) genome patterns before and after transverse aortic constriction in Balb/cJ and Balc/cByJ mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BW SRA Run Selector	Maha Abdellatif	May 11, 2021
GSE165279	The effect of diet on H3K9-butyryl and H3K9-acetyl in the heart before and after transverse aortic constriction in C57Bl/6J mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BW XLSX SRA Run Selector	Maha Abdellatif	May 11, 2021
GSE165284	ACAA2 genome-binding patterns before and after transverse aortic constriction in C57Bl/6J mice on different diets [ACAA2]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW XLSX SRA Run Selector	Maha Abdellatif	May 11, 2021