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34748 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing
GSE160313	In vivo CRISPR screening reveals nutrient signaling processes underpinning CD8+ T cell fate decisions [Pofut1 ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TSV SRA Run Selector	Hongbo Chi	Feb 25, 2021
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE160087	Chromatin landscape associated with sexual differentiation in a UV sex determination system	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Ectocarpus sp. Ec457 Ectocarpus sp. Ec460	44	BED BW TAB SRA Run Selector	Olivier GODFROY	Mar 21, 2022
GSE75547	Determine the effects of Hdac3 deletion on H3K27ac profiles in murine chondrocytes[ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	TXT SRA Run Selector	Jennifer Jane Westendorf	Aug 10, 2016
GSE215318	Doxorubicin Changes the Spatial Organization of the Genome around Active Promoters	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	21	BW	Maria Valieva	Mar 31, 2023
GSE215325	Doxorubicin Changes the Spatial Organization of the Genome around Active Promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	30	BW HIC	Maria Valieva	Mar 31, 2023
GSE98427	Epigenetic activation during Th17 cell differentiation is impaired after TRIM28 deletion	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	TDF TXT WIG SRA Run Selector	Huiping Lu	Feb 22, 2018
GSE115357	FBXO11-Mediated Proteolysis of BAHD1 Relieves PRC2-dependent Transcriptional Repression in Erythropoiesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	50	BW TXT SRA Run Selector	Mitch Weiss	Dec 31, 2020
GSE71780	Functional interdependency of BRD4 and DOT1L in MLL leukaemia	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	33	BED	Mark Dawson	Jun 12, 2016
GSE99154	H3K36me3 protects the mouse epigenome from single nucleotide variations [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Jin Sun	Aug 01, 2019
GSE185066	Local euchromatin enrichment in lamina-associated domains anticipates their re-positioning in the adipogenic lineage	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	82	BED BEDGRAPH BROADPEAK BW NARROWPEAK TXT SRA Run Selector	Philippe Collas	Mar 21, 2022
GSE205348	Loss of LCMT1 and biased protein phosphatase 2A heterotrimerization drive prostate cancer progression and therapy resistance	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	11	BW	Irfan Asangani	Jun 08, 2023
GSE76224	Single-cell epigenomic variability reveals functional cancer heterogeneity	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	BW NARROWPEAK SRA Run Selector	Howard Chang	Dec 12, 2016
GSE98380	Targeting the MTF2-MDM2 Axis Sensitizes Refractory Acute Myeloid Leukemia to Chemotherapy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	30	BW	William Stanford	Jul 31, 2018
GSE98378	Targeting the MTF2-MDM2 Axis Sensitizes Refractory Acute Myeloid Leukemia to Chemotherapy [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BW TXT SRA Run Selector	William Stanford	Jul 31, 2018
GSE145387	The Transcriptional Repressors VAL1 and VAL2 Recruit PRC2 for Genome-wide Polycomb Silencing in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	TXT SRA Run Selector	Liang Bing Yuan	Nov 06, 2020
GSE73783	Three-dimensional disorganisation of the cancer genome occurs coincident with long range genetic and epigenetic alterations [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED SRA Run Selector	Joanna Achinger-Kawecka	Apr 04, 2016
GSE118946	ZBTB12-HERVH-LncRNA axis is a molecular barrier for dedifferentiation of human stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	23	BW TXT SRA Run Selector	Guojing Liu	Jun 30, 2021
GSE34791	"Calling Cards" for DNA-binding proteins in mammalian cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	7	BED TXT SRA Run Selector	David Mayhew	Dec 31, 2011
GSE55904	"Drug-seq": An Approach to Identify the Genomic Targets of Chemicals Identified by Functional Phenotypic Screens	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	6	BEDGRAPH	MICHAEL G ROSENFELD	Jul 01, 2014