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40530 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing
GSE11658	The association between gene expression and whole genome histone H3K4 mono-, di, and trimethylation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	CEL TAR XLS	Jean-Jack M. Riethoven	Dec 07, 2010
GSE11673	Identification of candidate p73 target genes	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	CEL	Jennifer Pietenpol	Aug 06, 2008
GSE11892	A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	11	TXT SRA Run Selector	Marc Sultan	Jul 03, 2008
GSE12646	Chromatin Signatures in Multipotent Human HSCs Indicate the Fate of Bivalent Genes during Differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	24	BED CEL CHP TXT SRA Run Selector	Chongzhi Zang	Jan 09, 2009
GSE12889	CTCF demarcates chromatin domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED CEL TXT SRA Run Selector	Raja Jothi	Oct 20, 2008
GSE13622	The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Saccharomyces cerevisiae synthetic construct	8	TAB TXT SRA Run Selector	Desiree Tillo	Dec 18, 2008
GSE14009	Nutritional control of gene expression during C. elegans L1 arrest and recovery	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	32	CEL CHP EXP	L. Ryan Baugh	Feb 27, 2009
GSE14097	An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	75	TXT	Jindan Yu	May 18, 2010
GSE14344	esBAF is an essential component of the core pluripotency transcriptional network	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CEL TXT SRA Run Selector	Raja Jothi	Jan 20, 2009
GSE15519	Expression and ChIP-seq analyses of embryonic stem cells, extraembryonic endoderm stem cells, and trophoblast stem cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CEL CHP WIG SRA Run Selector	Brian Joseph Cox	May 17, 2010
GSE15735	Genome-wide mapping of HATs and HDACs in human CD4+ T cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	41	BED CEL CHP TXT XLS ZIP SRA Run Selector	Chongzhi Zang	Aug 20, 2009
GSE15909	Gene expression and UH2A ChIP-Seq binding analysis in Bmi1 knock-out and wild type MEFs	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CEL CHP TXT	Raja Jothi	May 20, 2009
GSE16375	Uncovering early response of gene regulatory networks in ES cells by systematic induction of transcription factors	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	342	TXT	Minoru S.H. Ko	Oct 01, 2009
GSE17067	A quantitative model of transcription regulation reveals the role of non-conserved enhancers	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BED CEL GPR TXT SRA Run Selector	Kenzie MacIsaac	May 13, 2010
GSE17312	BI Human Reference Epigenome Mapping Project	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE18017	Stat6 mediated regulation of transcription to initiate Th2 program in human T cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	116	CEL TXT	Henna Kallionpää	Jun 25, 2010
GSE18125	Epigenetic regulation of Bmp2 and Smad6 in Ras-induced senescence	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED CEL SRA Run Selector	Atsushi Kaneda	Dec 22, 2011
GSE18829	Discovering Hematopoietic Mechanisms Through Genome-Wide Analysis of GATA Factor Chromatin Occupancy	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BED TXT	Emery H. Bresnick	Nov 25, 2009
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE18990	Proteomic analysis of native hepatocyte nuclear factor-4{alpha} (HNF4{alpha}) isoforms, phosphorylation status, and interactive cofactors.	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	CEL TXT	Kenji Daigo	Dec 22, 2010