GEO Browser - GEO

Series

Samples

Platforms

DataSets

16031 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BED
GSE251935	Tunable DNMT1 degradation reveals cooperation of DNMT1 and DNMT3B in regulating DNA methylation dynamics and genome organization	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	14	BED MCOOL PQ TSV	Nezar Abdennur	Feb 01, 2024
GSE254377	Ldb1 establishes multi-enhancer networks to regulate gene expression [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	65	BED BW	Nicholas Aboreden	Nov 27, 2024
GSE20898	Genome-wide Analyses of Transcription Factor GATA3-Mediated Gene Regulation in Distinct T Cell Types	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH RPKM SRA Run Selector	Brian J Abraham	Aug 26, 2011
GSE39229	Mapping Epigenomic Type-Specific Differences Occurring During Hematopoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	BED RPKM TXT	Brian J Abraham	Mar 25, 2013
GSE39538	Mapping Epigenomic Type-Specific Differences Occurring During Hematopoiesis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	BED TXT SRA Run Selector	Brian J Abraham	Mar 25, 2013
GSE151011	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED BROADPEAK SRA Run Selector	Jakub Abramson	Sep 01, 2021
GSE151013	Mechanistic dissection of dominant AIRE mutations in mouse models reveals evidence for AIRE auto-regulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	102	BED BROADPEAK NARROWPEAK	Jakub Abramson	Aug 30, 2021
GSE73783	Three-dimensional disorganisation of the cancer genome occurs coincident with long range genetic and epigenetic alterations [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED SRA Run Selector	Joanna Achinger-Kawecka	Apr 04, 2016
GSE73785	Three-dimensional disorganisation of the cancer genome occurs coincident with long range genetic and epigenetic alterations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	22	BED	Joanna Achinger-Kawecka	Apr 04, 2016
GSE171074	The potential of epigenetic therapy to target the 3D epigenome in endocrine-resistant breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by array Other Methylation profiling by high throughput sequencing	Homo sapiens	88	BED BW HIC IDAT NARROWPEAK TXT	Joanna Achinger-Kawecka	Dec 12, 2021
GSE237769	Epigenetic therapy targets the 3D epigenome in endocrine-resistant breast cancer [CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	BED	Joanna Achinger-Kawecka	Jul 24, 2023
GSE45023	Genome-wide maps of chromatin state for H3.3 tagged cells	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	3	BED BIGWIG TXT SRA Run Selector	Peter D. Adams	Apr 18, 2013
GSE45024	Genome-wide maps of chromatin state for HIRA, UBN1 and ASF1a	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED BIGWIG TXT SRA Run Selector	Peter D. Adams	Apr 18, 2013
GSE45025	Placing the HIRA histone chaperone complex in the chromatin landscape	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by array	Homo sapiens	15	BED BIGWIG CEL TXT	Peter D. Adams	Apr 18, 2013
GSE56307	Histone chaperone HIRA orchestrates H4K16ac-decorated dynamic chromatin in senescent cells and is required for suppression of oncogene-induced neoplasia.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	22	BED BIGWIG CSV SRA Run Selector	Peter Adams	Nov 26, 2014
GSE59316	Genome-wide mapping of H4K20me3 in proliferating and senescent IMR90 cells.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED SRA Run Selector	Peter Adams	May 27, 2016
GSE81969	Mapping H4K20me3 onto the chromatin landscape of senescent cells indicates a function in control of cell senescence and tumor suppression through preservation of genetic and epigenetic stability.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED SRA Run Selector	Peter Adams	May 27, 2016
GSE218881	Nanowell-based single-cell combinatorial indexed ATAC-seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	ARROW BED SRA Run Selector	Andrew Adey	Feb 08, 2023
GSE243430	Accessible high-throughput single-cell whole genome sequencing with paired chromatin accessibility	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	14	BED	Andrew Adey	Sep 18, 2023
GSE138845	Transcriptional rewiring of the GcrA/CcrM bacterial epigenetic regulatory system in closely related bacteria	Genome binding/occupancy profiling by high throughput sequencing	Brevundimonas subvibrioides	6	BED BW TXT SRA Run Selector	Satish Adhikari	Feb 01, 2020