GEO Browser - GEO

Series

Samples

Platforms

DataSets

180 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BEDPE
GSE286224	Endogenous fine-mapping of functional regulatory elements in complex genetic loci in HAP1 [microC]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BEDPE	Ke Zhao	Jan 10, 2025
GSE283392	Distinct use of super-enhancer elements controls cell type-specific CD25 transcription and function	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	25	BEDPE WIG	Peng Li	Dec 03, 2024
GSE251895	Decoding the Epigenetics and Chromatin Loop Dynamics of Androgen Receptor-Mediated Transcription [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	15	BEDPE COOL	Nathan A Lack	Sep 27, 2024
GSE251898	Decoding the Epigenetics and Chromatin Loop Dynamics of Androgen Receptor-Mediated Transcription	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Homo sapiens	75	BED BEDPE BW COOL SF	Nathan A Lack	Sep 26, 2024
GSE200114	Dynamic promoter-enhancer contacts contribute to spatiotemporal gene expression during mouse fetal development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	70	BEDPE BIGWIG HIC NARROWPEAK	Ming Hu	Sep 02, 2024
GSE223058	TFIIIC and MYCN link the three-dimensional chromatin structure of promoters to transcription termination of stalled RNA polymerase	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	62	BEDGRAPH BEDPE HIC	Martin Eilers	Jul 15, 2024
GSE186599	TULIPs decorate the three-dimensional genome of PFA ependymoma	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	160	BED BEDGRAPH BEDPE BROADPEAK BW GTF HIC MCOOL RDATA TDF TSV WIG	Marco Gallo	Jul 05, 2024
GSE230594	Oncogenic roles of SWI/SNF chromatin remodeling factors: therapeutic targets in T-cell acute lymphoblastic leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	88	BED BEDPE BROADPEAK BW NARROWPEAK	Tze King Tan	Jul 02, 2024
GSE214916	Enhancer engagement sustains oncogenic transformation and progression of B-cell precursor acute lymphoblastic leukemia	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	57	BEDPE BW MTX NARROWPEAK RESULTS TSV	Stefano Di Giovenale	Jun 27, 2024
GSE214018	Super-enhancer-driven PPP1R15B/CReP, regulated by C/EBPβ and YY1, is oncogenic in multiple myeloma [HiChIP I]	Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED BEDPE PAIRS	Tze King Tan	Jun 25, 2024
GSE267003	Super-enhancer-driven PPP1R15B/CReP, regulated by C/EBPβ and YY1, is oncogenic in multiple myeloma [HiChIP II]	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	8	BED BEDPE PAIRS	Tze King Tan	Jun 25, 2024
GSE267004	Super-enhancer-driven PPP1R15B/CReP, regulated by C/EBPβ and YY1, is oncogenic in multiple myeloma	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	16	BED BEDPE PAIRS	Tze King Tan	Jun 25, 2024
GSE247254	YY1-controlled regulatory connectivity and transcription are influenced by the cell cycle	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	121	BED BEDPE BW MCOOL TXT	Jessica C Lam	Jun 17, 2024
GSE265888	Loop Stacking Attenuates Chromatin Boundaries in TCR Loci During Thymocyte Development	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	85	BED BEDGRAPH BEDPE BROADPEAK BW CSV HIC MATRIX TXT	Hao bingtao	Apr 27, 2024
GSE224204	Functional investigation of inherited noncoding genetic variation impacting the pharmacogenomics of childhood acute lymphoblastic leukemia treatment	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens synthetic construct	117	BEDPE BIGWIG BW NARROWPEAK TXT	Daniel Savic	Apr 10, 2024
GSE254783	Functional investigation of inherited noncoding genetic variation impacting the pharmacogenomics of childhood acute lymphoblastic leukemia treatment [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	8	BEDPE	Daniel Savic	Apr 10, 2024
GSE228246	3D genomics analysis identifies enhancer hijacking caused by structural alterations and extrachromosomal circular DNA formation [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	24	BEDPE	Xiaoyang Zhang	Apr 02, 2024
GSE228247	3D genomic analysis reveals novel enhancer-hijacking caused by complex structural alterations that drive oncogene overexpression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	34	BEDPE BW RESULTS	Xiaoyang Zhang	Apr 01, 2024
GSE212568	Landscape of TFs binding in mouse early embryos	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	57	BED BEDPE BW	Gran Young	Mar 03, 2024
GSE228361	Landscape of TFs binding in mouse early embryos [HiCuT]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BEDPE	Gran Young	Mar 03, 2024