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10915 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BW
GSE240585	Baf155 controls hematopoietic differentiation and regeneration through chromatin priming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	24	ARROW BW MTX TSV	Changxu Fan	Jul 08, 2024
GSE31456	Transcriptional mechanisms controlling direct motor neuron programming	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	26	BAM BED BW CEL TXT WIG SRA Run Selector	Shaun Mahony	Jul 04, 2013
GSE31655	Dynamic Changes in Ezh2 Gene Occupancy Underlie Its Involvement in Neural Stem Cell Self-Renewal and Differentiation towards Oligodendrocytes	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BAM BW WIG SRA Run Selector	Falak Sher	Jul 30, 2012
GSE32880	Conserved Function of lincRNAs in Vertebrate Embryonic Development Despite Rapid Sequence Evolution	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Danio rerio	16	BAM BED BW SRA Run Selector	Igor Ulitsky	Dec 22, 2011
GSE33664	Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation	Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	10	BAM BED BW TXT SRA Run Selector	Guoliang Li	Jan 20, 2012
GSE39435	Induced Cdx2 binding in embryonic stem cells and endodermal cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BAM BW WIG SRA Run Selector	Shaun Mahony	Mar 27, 2014
GSE42413	The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus	56	BAM BED BW SRA Run Selector	Justin Cotney	Jul 02, 2013
GSE57369	The chromatin modifier CHD8 targets autism risk genes during human neurodevelopment	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	26	BAM BED BW TXT SRA Run Selector	Justin Cotney	Jan 21, 2015
GSE81436	The ortholog of DDM1 is mainly required for CHG and CG methylation of heterochromatin and is involved in DRM2-mediated CHH methylation that targets mostly genic regions of the rice genome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Oryza sativa Japonica Group	17	BAM BW CSV GFF WIG XLS SRA Run Selector	chao zhou	Jun 13, 2016
GSE141290	Pervasive promoter-proximal regulation in archaea	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Saccharolobus solfataricus Saccharolobus solfataricus P2	84	BAM BW	Finn Werner	Sep 14, 2020
GSE144244	m6A RNA methylation regulates promoter proximal pausing of RNA Pol II (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	44	BAM BW SRA Run Selector	Junaid Akhtar	Jul 28, 2021
GSE210779	EKLF/Klf1 regulates erythroid transcription by its pioneering activity and selective control of RNA Pol II pause-release	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	43	BAM BED BW	Kaustav Mukherjee	Jan 18, 2023
GSE36049	A molecular mechanism for compartmentalization and silencing of chromatin domains at the nuclear lamina	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Mus musculus	7	BAR BED BW CEL	Joseph M Zullo	Feb 24, 2012
GSE80235	The Mot1 ATPase and Spt16 Histone Chaperone Co-Regulate Transcription Through Preinitiation Complex Assembly and Nucleosome Organization	Expression profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	21	BAR BW CEL	David Auble	May 16, 2016
GSE80706	Removable insulator facilitates higher-order chromatin remodeling and selective gene expression in the HOXA locus via the retinoic acid signaling	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BAR BW CEL	Ko Ishihara	Jan 10, 2017
GSE28561	Genome-wide maps of HLH-1 binding in muscle-enriched embryos.	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BB BW	Diane E Trout	Jun 22, 2012
GSE28563	HLH-1 binding in muscle-enriched embryos and RNA expression in muscle-enriched embryos across different mutations	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	15	BB BW	Diane E Trout	Jun 22, 2012
GSE37350	Altered Subcellular Localization of Transcription Factor TEAD4 Regulates First Mammalian Cell Lineage Commitment	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BB BW SRA Run Selector	Byunggil Yoo	Apr 18, 2012
GSE49010	Genome-wide maps of chromatin state in E12.5 mouse forelimbs	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BB BW SRA Run Selector	Chrissa Kioussi	Feb 20, 2015
GSE60430	Regulatory logic of the coupled diurnal and feeding cycles in the mouse liver [DNase-seq, ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	45	BB BW TXT SRA Run Selector	Jonathan Aryeh Sobel	Dec 31, 2016