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10613 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BW
GSE136685	The regulatory landscape of early maize inflorescence development	Genome binding/occupancy profiling by high throughput sequencing	Zea mays	8	ZIP TXT BW BED SRA Run Selector	Andrea Eveland	Jun 05, 2020
GSE142996	DNA polymerase α interacts with H3-H4 and facilitates the transfer to parental histones to lagging strand	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus Saccharomyces cerevisiae	99	ZIP TXT BW SRA Run Selector	zhiguo zhang	Sep 02, 2020
GSE145657	Single cell Chromatin Accessibility profiling of forelimb bud at stage E11.5 in WT and Hox13 mutant (10x Chromium)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	ZIP SNAP RDATA BW SRA Run Selector	Marie Kmita	Mar 26, 2020
GSE148321	Dietary palmitic acid promotes a prometastatic epigenetic memory related to tumor innervation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	1134	ZIP XLS TSV MTX CEL BW BROADPEAK	Antoni Berenguer-LLergo	Nov 16, 2021
GSE167381	LKB1 inactivation initiates a chromatin remodeling cascade to drive metastatic progression	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens Mus musculus	441	ZIP XLSX TXT TSV RDS CSV BW SRA Run Selector	Jeffrey Michael Granja	Apr 30, 2021
GSE183299	Cell and chromatin transitions in intestinal stem cell regeneration	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	ZIP BW SRA Run Selector	Ramesh Shivdasani	Jun 07, 2022
GSE183627	Investigating the regulatory role of KMT2D in neurodeveolopment using organoid and single cell techniques	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	86	ZIP TSV TAR RESULTS MTX BW	Yingying Zhao	Sep 06, 2024
GSE204952	Skin basal cell carcinomas assemble a pro-tumorigenic spatially organized and self-propagating Trem2+ myeloid niche	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	ZIP TSV TBI BW	Anthony Oro	Mar 28, 2023
GSE233892	Sperm chromatin accessibility’s involvement in the intergenerational effects of stress hormone receptor activation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	ZIP NARROWPEAK BW BROADPEAK	Vincent Valentin Tobias Fischer	Dec 08, 2023
GSE247391	Fate-mapping via Spp1-expression history revealed innate immune memory of microglia imprinted by neonatal injury [Spp1Tdt]	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	60	ZIP RDS CSV BW	DANYANG HE	Jan 24, 2024
GSE262931	Variants in tubule epithelial regulatory elements mediate most heritable differences in human kidney function	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	ZIP TSV TBI NARROWPEAK H5 BW	Gabriel Loeb	Jul 05, 2024
GSE74278	Transposable elements and their KRAB-ZFP controllers regulate gene expression in adult tissues	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	XML TXT BW BED SRA Run Selector	Julien Duc	Mar 15, 2016
GSE42705	The Aurora B kinase and the polycomb protein Ring1B combine to regulate active promoters in quiescent lymphocytes [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	XLSX BW SRA Run Selector	Gopuraja Dharmalingam	Sep 27, 2013
GSE42706	The Aurora B kinase and the polycomb protein Ring1B combine to regulate active promoters in quiescent lymphocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	XLSX BW	Gopuraja Dharmalingam	Sep 27, 2013
GSE43786	Physiological Vascular Permeability Requires Induction of Endothelial NR4A1 by Progesterone Receptor [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	XLSX BW SRA Run Selector	Lauren Goddard	Jan 01, 2014
GSE43789	Physiological Vascular Permeability Requires Induction of Endothelial NR4A1 by Progesterone Receptor	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	XLSX GTF BW	Lauren Goddard	Jan 01, 2014
GSE46503	Selective suppression of endothelial cytokine production by progesterone receptor	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	14	XLSX GTF BW	Lauren Goddard	Jan 01, 2014
GSE56617	Dynamics of Genomic H3K27me3 Domains and Role of EZH2 during Pancreatic Endocrine Specification	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	XLSX BW BED SRA Run Selector	Gregory Donahue	Jul 28, 2014
GSE57926	RBFox2 regulates a broad RNA program and is required for genome-wide targeting of polycomb complex	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	33	XLSX BW SRA Run Selector	Xiang-Dong Fu	Oct 22, 2015
GSE60240	CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	38	XLSX TXT BW	Danny Reinberg	Feb 26, 2015