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47 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			FASTA
GSE152502	Interactive analysis of single-cell epigenomic landscapes with ChromSCape	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	FASTA TXT SRA Run Selector	Céline Vallot	Jun 16, 2020
GSE163680	Genome-wide distribution of Tus-GFP in KRX E. coli	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli KRX	2	FASTA TXT SRA Run Selector	Patrick Schaeffer	Dec 01, 2021
GSE102550	Genome-wide identification of Grainy head targets in Drosophila [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	3	BED FASTA SRA Run Selector	Christos Samakovlis	Aug 12, 2017
GSE44176	Genome wide binding of Insensitive in w[1118] embryos	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BED FASTA	Jakub Orzechowski Westholm	Apr 04, 2013
GSE99262	APC ChIP-seq in HCT-116 colon cancer cell line	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	FASTA XLSX SRA Run Selector	Joanna Groden	May 24, 2018
GSE71024	HiC of Wild Type Neurospora crassa and mutants deficient in heterochromatin formation	Genome binding/occupancy profiling by high throughput sequencing Other	Neurospora crassa	5	FASTA GTF TDF TXT SRA Run Selector	Andrew David Klocko	May 19, 2016
GSE41063	The APSES Transcription factor Efg1 regulates a novel phenotype switch in Candida parapsilosis [ChIP-seq].	Genome binding/occupancy profiling by high throughput sequencing	Candida parapsilosis	6	FASTA TXT SRA Run Selector	Geraldine Butler	Jun 20, 2013
GSE134143	Chromatin fiber invasion and nucleosome displacement by the Rap1 transcription factor	Genome binding/occupancy profiling by high throughput sequencing	synthetic construct	6	BIGWIG FASTA SRA Run Selector	Sevil Zencir	Nov 21, 2019
GSE206874	Nuclear functions of KaeA, the subunit of KEOPS complex in Aspergillus nidulans	Genome binding/occupancy profiling by high throughput sequencing	Aspergillus nidulans	6	BED FASTA TSV TXT	Agnieszka Dzikowska	Oct 28, 2022
GSE99264	Chromatin binding profiles of the APC tumor suppressor and changes in gene expression following APC silencing	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	7	FASTA XLSX	Joanna Groden	May 24, 2018
GSE107972	RecBCD Coordinates Repair of Two Ends at a DNA Double-Strand Break, Preventing Aberrant Chromosome Amplification [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12	8	CSV FASTA TXT SRA Run Selector	Benura Azeroglu	Jul 18, 2018
GSE117541	Genomic Analysis of DNA Double-Strand Break Repair in Escherichia coli	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli	8	CSV FASTA SRA Run Selector	Benura Azeroglu	Jan 03, 2019
GSE135002	Conditional expression of PfAP2-G for controlled massive sexual conversion in Plasmodium falciparum. [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Plasmodium falciparum	8	BED BEDGRAPH FASTA SRA Run Selector	Oriol Llorà-Batlle	Jun 10, 2020
GSE30372	Analysis of the Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development.	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Notamacropus eugenii	10	FASTA	James R Lindsay	Jul 31, 2011
GSE44178	The BEN domain is a novel sequence-specific DNA binding domain conserved in neural transcriptional repressors	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	10	BED CEL FASTA	Jakub Orzechowski Westholm	Apr 04, 2013
GSE117309	High-throughput single-cell ChIP-seq identifies heterogeneity of chromatin states in breast cancer	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	FASTA TAR TXT SRA Run Selector	Kevin Grosselin	Apr 12, 2019
GSE46607	Transcriptional regulation of germinal center B and plasma cell fates by dynamical control of IRF4 (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BED FASTA SRA Run Selector	Mark Maienschein-Cline	May 04, 2013
GSE141676	Rapid and Inexpensive Preparation of Genome-Wide Nucleosome Footprints from Model and Non-Model Organisms	Genome binding/occupancy profiling by high throughput sequencing	Neurospora crassa Saccharomyces cerevisiae Schizosaccharomyces pombe	13	FASTA GTF SGR SRA Run Selector	Jeffrey N McKnight	Dec 10, 2019
GSE49865	Bacterial Argonaute samples the transcriptome to identify foreign DNA	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Cereibacter sphaeroides ATCC 17025 Cereibacter sphaeroides ATCC 17029 Escherichia coli BL21(DE3)	16	FASTA SRA Run Selector	Ivan Olovnikov	Sep 12, 2013
GSE82222	Neurospora crassa genome organization requires subtelomeric facultative heterochromatin	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Neurospora crassa	16	BCF FASTA GTF TDF TXT XLSX SRA Run Selector	Andrew David Klocko	Oct 27, 2016