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191 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			GFF
GSE188643	A Notch-dependent transcriptional mechanism controls expression of temporal patterning factors in Drosophila medulla	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	BEDGRAPH GFF	Xin Li	Aug 10, 2022
GSE182079	A chromatin immunoprecipitation database for prokarytic organisms	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli Escherichia coli K-12 Klebsiella pneumoniae Pseudomonas putida Salmonella enterica Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 Shigella flexneri Staphylococcus aureus Yersinia pseudotuberculosis	102	GFF	Ye Gao	Aug 17, 2021
GSE182077	A chromatin immunoprecipitation database for prokarytic organisms [E. coli K-12 MG1655 ArcA]	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12	18	GFF SRA Run Selector	Ye Gao	Aug 17, 2021
GSE182078	A chromatin immunoprecipitation database for prokarytic organisms [E. coli K-12 MG1655 mixTF]	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12	16	GFF SRA Run Selector	Ye Gao	Aug 17, 2021
GSE181993	A chromatin immunoprecipitation database for prokarytic organisms [Escherichia coli]	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12	2	GFF SRA Run Selector	Ye Gao	Aug 15, 2021
GSE181767	A chromatin immunoprecipitation database for prokarytic organisms [NAP]	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12	28	GFF SRA Run Selector	Ye Gao	Aug 15, 2021
GSE182128	A chromatin immunoprecipitation database for prokarytic organisms [RpoD]	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12	4	GFF SRA Run Selector	Ye Gao	Aug 18, 2021
GSE182080	A chromatin immunoprecipitation database for prokarytic organisms [Staphylococcus aureus]	Genome binding/occupancy profiling by high throughput sequencing	Staphylococcus aureus	10	GFF SRA Run Selector	Ye Gao	Aug 15, 2021
GSE181770	A chromatin immunoprecipitation database for prokarytic organisms [fur]	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli Klebsiella pneumoniae Salmonella enterica Shigella flexneri Yersinia pseudotuberculosis	14	GFF SRA Run Selector	Ye Gao	Aug 15, 2021
GSE181772	A chromatin immunoprecipitation database for prokarytic organisms [multi_tf]	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli K-12	6	GFF SRA Run Selector	Ye Gao	Aug 15, 2021
GSE181775	A chromatin immunoprecipitation database for prokarytic organisms [putida]	Genome binding/occupancy profiling by high throughput sequencing	Pseudomonas putida	2	GFF SRA Run Selector	Ye Gao	Aug 15, 2021
GSE181791	A chromatin immunoprecipitation database for prokarytic organisms [salmonella]	Genome binding/occupancy profiling by high throughput sequencing	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	6	GFF SRA Run Selector	Ye Gao	Aug 15, 2021
GSE118118	A combination of transcription factors mediates inducible interchromosomal contacts	Other Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae Saccharomyces cerevisiae x Saccharomyces uvarum synthetic construct	123	BED BEDGRAPH FA GFF TXT SRA Run Selector	Seungsoo Kim	Aug 05, 2018
GSE124427	A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Daphnia pulex	31	FA GFF NARROWPEAK TXT SRA Run Selector	Jouni Antero Kvist	Oct 18, 2019
GSE162387	A leukemia-protective germline variant mediates chromatin module formation via transcription factor nucleation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	18	BW GFF TXT SRA Run Selector	Bart Deplancke	Feb 08, 2022
GSE36795	A role for the nucleoporin Nup170p in chromatin structure and gene silencing	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by array Expression profiling by array	Saccharomyces cerevisiae	14	GFF TSV TXT	Yakun Wan	Feb 28, 2013
GSE19461	Activin/Nodal signalling controls divergent transcriptional networks in pluripotent and endoderm progenitors.	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BED GFF TXT SRA Run Selector	Matthew Trotter	Nov 11, 2011
GSE59980	Analysis of an artificial zinc finger epigenetic modulator: widespread binding but limited regulation	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	25	BED GFF TXT SRA Run Selector	Matt Grimmer	Aug 01, 2014
GSE143313	BCL9/STAT3 Regulation of Transcriptional Enhancer Networks Promote DCIS Progression	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	12	GFF SRA Run Selector	Hanan Elsarraj	Jan 09, 2020
GSE20369	Binding site turnover produces pervasive quantitative changes in TF binding between closely related Drosophila species	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Drosophila yakuba	20	GFF TXT	Michael Eisen	Feb 18, 2010