50 series
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Accession Title Series type(s) Organism(s) Samples GDS Supplementary Contact Release date
Remove filtersFilter Remove filterGenome binding/occupancy profiling by high throughput sequencing Remove filterMCOOL
GSE251935
Tunable DNMT1 degradation reveals cooperation of DNMT1 and DNMT3B in regulating DNA methylation dynamics and genome organization
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
14 Nezar Abdennur Feb 01, 2024
GSE194268
Loss of Cohesin regulator PDS5A reveals repressive role of Polycomb loops
115 Oliver Bell Nov 10, 2023
GSE210289
Igh and Igk loci use different folding principles for V gene recombination due to distinct chromosomal architectures of pro-B and pre-B cells
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
36 Meinrad Busslinger Jan 15, 2023
GSE130275
Resolving the 3D landscape of transcription-linked mammalian chromatin folding
  • Other
  • Genome binding/occupancy profiling by high throughput sequencing
56 Xavier Darzacq May 21, 2019
GSE178982
Enhancer-promoter interactions and transcription are maintained upon acute loss of CTCF, cohesin, WAPL, and YY1
173 Xavier Darzacq Jul 15, 2021
GSE187487
Regulation of Chromatin Looping by CTCF and Cohesin
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
9 Xavier Darzacq Dec 31, 2021
GSE183806
Chromatin architecture of B cell development during the humoral immune response
107 Ashley Stephen Doane Sep 09, 2021
GSE123245
Setdb1 regulates Cohesin at H3K9me3-independent topological domains
37 Chadi El Farran Dec 01, 2020
GSE214707
Chromosome-level organization of the regulatory genome in the Drosophila nervous system
34 Maria Cristina Gambetta Aug 01, 2023
GSE207225
Ultra-deep 3D genome structure mapping with Region Capture Micro-C
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
18 Viraat Y Goel Jul 12, 2022
GSE162617
Transcription Factors Recruit the Cohesin Loader NIPBL to Promote Chromatin Looping and Long-range Gene Regulation
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
11 Gordon Hager Jun 01, 2021
GSE218020
Localization of the Drosophila pioneer factor GAF to subnuclear foci is driven by DNA binding and required to silence satellite repeat expression
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
26 Melissa M Harrison Jun 26, 2023
GSE212809
An epigenetic switch triggers alternative telomere lengthening and cellular immortalization in ATRX deficient cells
  • Genome binding/occupancy profiling by high throughput sequencing
30
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Dirk Hockemeyer Feb 21, 2023
GSE197736
Recruitment of transcriptional effectors by Cas9 creates cis regulatory elements and demonstrates distance-dependent transcriptional regulation
  • Genome binding/occupancy profiling by high throughput sequencing
1 Noam Kaplan Mar 05, 2022
GSE200078
A novel approach uncovering the biological signal in Hi-C data affected by technical biases
  • Genome binding/occupancy profiling by high throughput sequencing
12
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Victoria Kobets Feb 05, 2023
GSE247254
YY1 controlled regulatory connectivity and transcription are influenced by the cell cycle
121 Jessica C Lam Jun 17, 2024
GSE214811
Stage-specific erythroid cell three-dimensional chromatin architecture and transcription factors binding provide insight of human erythropoiesis
99 Dong Li May 06, 2023
GSE213501
Enhancer Cis Elements Instruct Promoter-Enhancer Interaction, Promoter-Enhancer Insulation and Compartmental Segregation
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
30 Hanbin Lu Dec 31, 2023
GSE138543
Suppression of liquid-liquid phase separation by 1,6-hexanediol partially compromises the 3D genome organization in living cells
  • Genome binding/occupancy profiling by high throughput sequencing
  • Other
22 Mikhail Magnitov Mar 22, 2021
GSE168233
SETDB1 Fuels the Lung Cancer Phenotype by Modulating Epigenome, 3D Genome Organization, and Chromatin Mechanical Properties
40 Mikhail Magnitov Mar 29, 2022