GEO Browser - GEO

Series

Samples

Platforms

DataSets

3165 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			NARROWPEAK
GSE26328	DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Human]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	53	BAM BIGWIG BROADPEAK NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Dec 29, 2010
GSE29531	Genetic Framework for GATA Factor Function in Vascular Biology	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BAM BIGWIG NARROWPEAK SRA Run Selector	Philip Cayting	Aug 11, 2011
GSE29692	DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	208	BAM BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	ENCODE DCC	Jun 03, 2011
GSE30263	CTCF Binding Sites by ChIP-seq from ENCODE/University of Washington	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	174	BAM BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	ENCODE DCC	Jun 29, 2011
GSE30401	AlleleSeq: Analysis of Allele-Specific Expression and Binding in a Network Framework	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BAM NARROWPEAK TAGALIGN	Joel Rozowsky	Jul 09, 2011
GSE49847	A comparative encyclopedia of DNA elements in the mouse genome	Expression profiling by high throughput sequencing Genome variation profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	588	BAM BEDRNAELEMENTS BIGWIG BROADPEAK NARROWPEAK PAIR	ENCODE DCC	Aug 14, 2013
GSE51336	Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	266	BAM BED BIGWIG BROADPEAK NARROWPEAK WIG	ENCODE DCC	Nov 20, 2014
GSE188491	Chromatin accessibility mapping for GWAS risk loci reveals compound genetic effects of neurodevelopment and neurodegenerative disorders in human neurons	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	106	BAM NARROWPEAK TAR TXT	Jubao Duan	Jan 23, 2022
GSE213970	Chromatin accessibility differences between alpha, beta, and delta cells identifies common and cell type-specific enhancers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BAM NARROWPEAK	Mark O. Huising	Jan 19, 2023
GSE114803	Long non-coding RNAs discriminate the stages and gene regulatory states of the human humoral immune response	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BB BW NARROWPEAK SRA Run Selector	Ashley Stephen Doane	Jan 17, 2019
GSE114804	ChIP-seq in human tonsilar Naïve and Germinal Center B cells and DLBCL cell lines	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	41	BB BW NARROWPEAK	Ashley Stephen Doane	Jan 16, 2019
GSE146292	Stepwise chromatin and transcriptional acquisition of an intraepithelial lymphocyte program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	BB BED BIGWIG H5 MTX NARROWPEAK TSV SRA Run Selector	Tiago Castro	Jan 04, 2021
GSE247320	Histone methyltransferase Ezh2 coordinates mammalian axon regeneration via regulation of key regenerative pathways	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	BB NARROWPEAK	Xuewei Wang	Dec 22, 2023
GSE267154	ATAC-seq of frozen H1 Human Embryonic Stem Cells (hESC)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BB BIGWIG NARROWPEAK	William James Greenleaf	May 12, 2024
GSE234716	KMT2D regulates gene expression through regulating promoters/enhances upon glucose deprivation.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	29	BCF BW NARROWPEAK TXT	Cunyu Wang	Jul 05, 2024
GSE30224	Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [DNase_seq].	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	3	BED NARROWPEAK SRA Run Selector	Terry Furey	Jun 29, 2011
GSE30225	Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [FAIRE_seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	BED NARROWPEAK SRA Run Selector	Terry Furey	Jun 29, 2011
GSE30226	Open chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [ChIP_seq].	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	33	BED NARROWPEAK SRA Run Selector	Terry Furey	Jun 29, 2011
GSE55581	Diet-induced chromatin remodeling in mice livers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	20	BED BEDPE DIFF NARROWPEAK SRA Run Selector	Amy Leung	Jul 17, 2014
GSE60731	Regulation of chromatin accessibility and Zic binding at enhancers in the developing cerebellum	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	63	BED NARROWPEAK TXT SRA Run Selector	Christopher L Frank	Feb 27, 2015