GEO Browser - GEO

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23 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			SRA Run Selector		Dec 01, 2020
GSE155317	DNA features beyond the transcription factor binding sites specify target recognition by plant bHLHs [DAP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana Marchantia polymorpha Solanum lycopersicum	27	NARROWPEAK SRA Run Selector	Jose M. Franco-Zorrilla	Dec 01, 2020
GSE156548	Two parallel pathways recruit the H3K9me3 HMT in somatic cells, requiring the Argonaut NRDE-3, or the MBT-domain protein, LIN-61 (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	60	TAB SRA Run Selector	Jan Padeken	Dec 01, 2020
GSE40472	Selective lymphoma cell killing by a PRC2 small molecule inhibitor (ChIP-Seq set 1)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TDF WIG SRA Run Selector	Barbara M Bryant	Dec 01, 2020
GSE40473	Selective lymphoma cell killing by a PRC2 small molecule inhibitor (ChIP-Seq set 2)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TDF WIG SRA Run Selector	Barbara M Bryant	Dec 01, 2020
GSE112967	Genome-wide maps of DPF2 and H3K14 modifications in K562 cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED SRA Run Selector	fan feng	Dec 01, 2020
GSE133183	H3K27me3-rich genomic regions can function as silencers to repress gene expression via chromatin interactions	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Homo sapiens	173	BROADPEAK NARROWPEAK TSV TXT SRA Run Selector	Melissa Fullwood	Dec 01, 2020
GSE140329	Chromatin modification is not a prerequisite for p63 binding but p63 binding can elicit chromatin remodeling	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	NARROWPEAK SRA Run Selector	Michael Buck	Dec 01, 2020
GSE141293	FOXQ1 is a critical regulator of the mammary epithelial to mesenchymal transcription program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	BED CSV SRA Run Selector	Allison V Mitchell	Dec 01, 2020
GSE150064	ATAC-seq profiling of of cell lines derived from primary human cornea epithelial cells (hTCEpi) and human primary corneal keratocyte cells ( hTK)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BW SRA Run Selector	Yatendra Kumar	Dec 01, 2020
GSE152733	The TAZ-CAMTA1 and YAP-TFE3 fusion proteins modulate the basal TAZ/YAP transcriptional program by recruiting the Ada2a-containing histone acetyltransferase complex [atacseq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	20	NARROWPEAK SRA Run Selector	Michael S Chimenti	Dec 01, 2020
GSE152778	The TAZ-CAMTA1 and YAP-TFE3 fusion proteins modulate the basal TAZ/YAP transcriptional program by recruiting the Ada2a-containing histone acetyltransferase complex [chipseq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	34	NARROWPEAK SRA Run Selector	Michael S Chimenti	Dec 01, 2020
GSE107641	Klf4 has an unexpected protective role in perivascular cells within the microvasculature	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED SRA Run Selector	Gary K Owens	Dec 01, 2020
GSE122120	Examination of Glis3 binding and affects on gene expression in mouse pancreas	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED BIGWIG TXT SRA Run Selector	Anton M Jetten	Dec 01, 2020
GSE123244	Setdb1 regulates Cohesin at H3K9me3-independent topological domains [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH TXT SRA Run Selector	Chadi El Farran	Dec 01, 2020
GSE141471	The Human Accelerated Region HACNS1 modifies developmental gene expression in humanized mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BW H5 TXT SRA Run Selector	James P. Noonan	Dec 01, 2020
GSE143711	A hotspot mutation p.L162R in IKZF3 drives leukemogenesis via transcriptional dysregulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BIGWIG BW TXT SRA Run Selector	Catherine Wu	Dec 01, 2020
GSE152719	Identification of conserved cis-regulatory elements impact Mecp2 level and neurological functions	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW SRA Run Selector	Manuel Eliezer Cantu Gutierrez	Dec 01, 2020
GSE159436	Epigenetic gene-expression links heart failure to memory impairment [chipseq_tg_wt_3m]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED XLS SRA Run Selector	Md Rezaul Islam	Dec 01, 2020
GSE159475	Epigenetic gene-expression links heart failure to memory impairment [chipseq_from_saha_treatment]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BED SRA Run Selector	Md Rezaul Islam	Dec 01, 2020
GSE148170	A role for the Mre11–Rad50–Xrs2 complex in gene expression and chromosome organization	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	29	BW TAB SRA Run Selector	romain forey	Dec 01, 2020