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1674 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			TSV
GSE15780	Interplay between c-Jun and TAp73α/β contributes to the apoptosis-survival balance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	BED TSV TXT SRA Run Selector	Marion Lohrum	Mar 01, 2011
GSE26439	The tumor antigen PRAME is a substrate recognition subunit of a Cul2-based ubiquitin ligase and is associated with active NFY promoters	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	5	BED TSV WIG SRA Run Selector	H.G. Stunnenberg	Jul 29, 2011
GSE30739	Genome-wide binding map of the HIV Tat protein to the human genome	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	TSV TXT	Siavash K Kurdistani	Nov 06, 2011
GSE35213	T-cell factor 4 and β-catenin chromatin occupancies pattern zonal liver metabolism.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED TSV SRA Run Selector	Philippe Veber	Jan 18, 2014
GSE36106	4-7 Hour ORC ChIP-Seq experiment	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH TSV SRA Run Selector	DCC modENCODE	Feb 27, 2012
GSE36107	4-7 Hour PolII ChIP-Seq experiment	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH TSV SRA Run Selector	DCC modENCODE	Feb 27, 2012
GSE36795	A role for the nucleoporin Nup170p in chromatin structure and gene silencing	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by array Expression profiling by array	Saccharomyces cerevisiae	14	GFF TSV TXT	Yakun Wan	Feb 28, 2013
GSE39502	Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED PDF TSV WIG SRA Run Selector	Sebastien Vigneau	Oct 11, 2013
GSE39523	Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BED TSV WIG	Sebastien Vigneau	Oct 11, 2013
GSE40740	Genome wide co-localization of Polycomb orthologs and their effects on gene expression in human fibroblasts	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	27	BED TSV WIG SRA Run Selector	Gordon Peters	Dec 19, 2013
GSE42132	ChIP-seq analysis of Gli1 and Sox2 input to neural progenitor program and integration with actve histone marks	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED TSV SRA Run Selector	Kevin Peterson	Dec 15, 2012
GSE42474	Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes [ChIP-Seq and RNA-seq]	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	9	TSV WIG SRA Run Selector	Richard A Young	Jan 02, 2013
GSE42594	cis-Regulation of Shh-directed neural pattering	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Mus musculus	16	BED CEL TSV	Kevin Peterson	Dec 15, 2012
GSE44288	Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	23	TSV TXT WIG	Richard A Young	Feb 13, 2013
GSE45282	Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Non-coding RNA profiling by array	Mus musculus	32	BED CALLS PAIR TSV	Abhinav Nellore	Apr 11, 2013
GSE47819	Epigenetic and genetic changes during mouse hematopoietic stem cell aging	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	37	BED TSV	deqiang sun	Apr 30, 2014
GSE50793	Role of de novo DNA methyltransferases in hematopoietic stem cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	27	BED TSV	deqiang sun	Aug 19, 2014
GSE52397	C/EBPα poises B cells for rapid reprogramming into iPS cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	48	BED TSV TXT	Bruno Di Stefano	Nov 17, 2013
GSE52974	The 8q24 cleft lip susceptibility locus is a remote Myc enhancer required for normal face morphology	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	11	BED BW TSV TXT SRA Run Selector	Massimo Petretich	Apr 03, 2014
GSE53499	LED, a long non-coding RNA activator of enhancer RNAs, is hypermethylated in human cancers	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Homo sapiens	21	BED TSV WIG SRA Run Selector	Koos Rooijers	Mar 24, 2015