GEO Browser - GEO

Series

Samples

Platforms

DataSets

19182 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			TXT
GSE11074	Chromatin state maps (H3K4me3 and H3K27me3) from partially and fully reprogrammed mouse cell lines	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	TXT SRA Run Selector	Tarjei S Mikkelsen	May 28, 2008
GSE11431	Mapping of transcription factor binding sites in mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	BED TXT SRA Run Selector	Chia-Lin Wei	Jun 12, 2008
GSE11892	A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	11	TXT SRA Run Selector	Marc Sultan	Jul 03, 2008
GSE11172	Genome-wide chromatin state maps of ES cells, ES-derived neural progenitor cells and brain tissue	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	TXT SRA Run Selector	Tarjei S Mikkelsen	Jul 06, 2008
GSE9367	IRF4 ChIP-on-chip for Myeloma Cell Lines	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	TXT	Louis M. Staudt	Jul 07, 2008
GSE12241	Genome-wide maps of chromatin state in pluripotent and lineage-committed cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	TXT SRA Run Selector	Tarjei S Mikkelsen	Jul 25, 2008
GSE11724	Connecting microRNA genes to the core transcriptional regulatory circuitry of embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	25	TXT SRA Run Selector	Whitehead Institute	Jul 30, 2008
GSE11485	A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	TXT	Peter J Park	Aug 22, 2008
GSE12781	PolII transcription factor in Human HeLa S3	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Flora Vaccarino	Sep 16, 2008
GSE12782	STAT1 transcription factor in Human HeLa S3	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Flora Vaccarino	Sep 16, 2008
GSE12783	Genome-wide maps of transcription factor binding using ChIP-Seq for Human ENCODE	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TXT	Flora Vaccarino	Sep 16, 2008
GSE13008	Genome-wide mapping of RNA Polymerase II binding sites	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED TXT SRA Run Selector	Flora Vaccarino	Oct 02, 2008
GSE12889	CTCF demarcates chromatin domains	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	7	BED CEL TXT SRA Run Selector	Raja Jothi	Oct 20, 2008
GSE13047	Genome-Wide Mapping of in Vivo Protein-DNA Interactions	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT	Shujun Luo	Oct 24, 2008
GSE13322	Efficient Yeast ChIP-Seq using Multiplex Short-Read DNA Sequencing	Genome binding/occupancy profiling by high throughput sequencing	Saccharomyces cerevisiae	6	TXT	Ghia Euskirchen	Oct 24, 2008
GSE13084	Mapping polycomb complexes in human and mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	TXT SRA Run Selector	Tarjei S Mikkelsen	Nov 01, 2008
GSE11389	Mouse Chromosome 17 Mapping in Two MEF Cell Lines	Genome binding/occupancy profiling by genome tiling array Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	39	TXT	Florian M Pauler	Nov 24, 2008
GSE13518	Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED TXT SRA Run Selector	Leighton James Core	Dec 04, 2008
GSE13622	The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus Saccharomyces cerevisiae synthetic construct	8	TAB TXT SRA Run Selector	Desiree Tillo	Dec 18, 2008
GSE14022	Mapping Novel Chromatin Regions Using Sono-Seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TXT SRA Run Selector	Raymond K Auerbach	Dec 18, 2008