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19272 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			TXT
GSE36375	Rev-erb(alpha) and (beta) Coordinately Protect the Circadian Clock and Normal Metabolic Function	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED TXT SRA Run Selector	Logan J Everett	Mar 09, 2012
GSE53041	Patterns of genome-wide VDR locations	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Sami Heikkinen	Nov 14, 2014
GSE53412	The C. elegans SNAP complex component SNPC-4 coats piRNA domains and globally affects piRNA abundance	Third-party reanalysis Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	14	BEDGRAPH TXT SRA Run Selector	Valerie Reinke	Nov 17, 2014
GSE53962	Transcription Factor Binding Sites by Motifs Scan	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TXT	Wenjie Shu	Oct 12, 2014
GSE59016	Transcription Factor Binding Sites clustered Regions of 133 Cell Lines	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens		TXT	Wenjie Shu	Oct 03, 2014
GSE59801	Comparative epigenomics of human and mouse erythropoiesis	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Austrofundulus limnaeus Homo sapiens Mus musculus		BED BW TXT	Vijay G Sankaran	Dec 01, 2014
GSE62742	Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	249	BEDPE BIGWIG NARROWPEAK TXT SRA Run Selector	Fabian Grubert	Aug 20, 2015
GSE63286	Kdm5b depletion in embryonic stem cells does not induce intragenic promoters or affect transcription [ChIP-Seq]	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	NARROWPEAK TXT SRA Run Selector	Andrew Johnston	Mar 21, 2020
GSE67540	RNA polymerase in pre-B-ALL cell lines	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	21	BEDGRAPH TXT SRA Run Selector	Merja Heinäniemi	Jul 05, 2016
GSE69919	Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics [ChIP-Seq]	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Pan troglodytes	9	BED TXT SRA Run Selector	Irene Gallego Romero	Jun 17, 2015
GSE71397	Identification of Arabidopsis thaliana PRR9 regulated clock components and circadian outputs through genome-wide binding sites analysis	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	4	BED TXT XLS SRA Run Selector	Tiffany L Liu	Dec 03, 2015
GSE73833	Humanized PRDM9 Mouse Testis H3K4me3 and DMC1 ChIP-seq	Third-party reanalysis Genome variation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	TXT VCF SRA Run Selector	Nicolas Altemose	Feb 02, 2016
GSE88699	High activity of a broad panel of housekeeping and tissue-specific cis-regulatory elements depends on a subset of ETS proteins	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED BIGWIG TXT SRA Run Selector	Alberto Termanini	Mar 13, 2017
GSE90454	Genetic determinants and epigenetic effects of pioneer factor binding [ChIP-seq]	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	44	TXT XLSX SRA Run Selector	Sudhir Thakurela	Jan 29, 2018
GSE94418	Transcriptional regulation of tDNA in H9 ESCs	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	13	CSV TSV TXT SRA Run Selector	keith e giles	Feb 02, 2020
GSE96994	DDM1/Lsh remodelers allow methylation of DNA wrapped in nucleosomes	Third-party reanalysis Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	15	BED BW GFF TXT SRA Run Selector	David B. Lyons	Nov 15, 2017
GSE98509	MYOD Remodeling of the Genome Architecture during Myogenic Conversion of Somatic Cells	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	16	BED BW CSV NARROWPEAK TXT SRA Run Selector	Alessandra Dall'Agnese	Sep 10, 2019
GSE98530	Re-Wiring 3D Nuclear Architecture by a Single Transcription Factor during Somatic Cell Reprogramming	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	24	BW CSV TXT	Alessandra Dall'Agnese	Sep 10, 2019
GSE99991	Investigating the role of SMCHD1 in de novo X chromosome inactivation	Third-party reanalysis Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	53	BED BEDGRAPH BW TXT SRA Run Selector	Chen-Yu Wang	Jun 07, 2018
GSE101397	Rapid chromatin switch in the direct reprogramming of fibroblasts to neurons	Third-party reanalysis Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	TXT SRA Run Selector	Qian Yi Lee	Sep 25, 2017