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2330 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			WIG
GSE13511	Genome-wide profiling of PPARγ:RXR and RNA polymerase II	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	18	BED WIG XLS SRA Run Selector	H.G. Stunnenberg	Dec 10, 2008
GSE12721	Chip-seq from MEF cells H3K27me3	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	GFF TXT WIG SRA Run Selector	Florian M Pauler	Dec 22, 2008
GSE15353	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	TXT WIG SRA Run Selector	Eric Chuah	Mar 23, 2009
GSE15814	High resolution analysis of epigenetic changes associated with X inactivation, ChIP-Seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED WIG SRA Run Selector	H.G. Stunnenberg	Jun 06, 2009
GSE15884	High resolution analysis of epigenetic changes associated with X inactivation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by genome tiling array Genome binding/occupancy profiling by genome tiling array	Mus musculus	58	BED GFF TXT WIG	H.G. Stunnenberg	Jun 06, 2009
GSE15188	Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli Saccharomyces cerevisiae	3	TXT WIG SRA Run Selector	Ghia Euskirchen	Jul 15, 2009
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16368	UCSF-UBC Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	529	BAM BED TAB WIG SRA Run Selector	UCSF-UBC CENTER	Aug 03, 2009
GSE17312	BI Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens	633	BAM BED CEL WIG SRA Run Selector	BROAD INSTITUTE	Aug 05, 2009
GSE18886	PML-RARa/RXR alters the epigenetic landscape in Acute Promyelocytic Leukemia	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	40	BED TXT WIG SRA Run Selector	H.G. Stunnenberg	Dec 17, 2009
GSE19708	Jarid2 and PRC2, Partner in Regulating Gene Expression	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BED WIG SRA Run Selector	Manching Ku	Jan 01, 2010
GSE18927	University of Washington Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens	758	BAM BED CEL TXT WIG SRA Run Selector	Northwest REMC	Jan 06, 2010
GSE19465	BI Human Reference Epigenome Mapping Project: ChIP-Seq in human subject	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	358	BED WIG SRA Run Selector	BROAD INSTITUTE	Jan 06, 2010
GSE17616	A map of open chromatin in human pancreatic islets	Genome binding/occupancy profiling by high throughput sequencing Genome binding/occupancy profiling by genome tiling array	Homo sapiens	5	BED PAIR WIG SRA Run Selector	Kyle Jeffrie Gaulton	Jan 31, 2010
GSE20136	Genome-wide nucleosome occupancy profiling by high throughput sequencing, and microarray analysis of RNA abundance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Caenorhabditis elegans	12	CALLS PAIR WIG SRA Run Selector	Jason D Lieb	Mar 02, 2010
GSE21026	Genome-wide assessment of differential roles for p300 and CBP in transcription regulation	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	6	WIG SRA Run Selector	Peter A.C. 't Hoen	Mar 30, 2010
GSE20530	Promoter proximal pausing and its regulation by c-Myc in embryonic stem cells: ChIP-Seq	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	TXT WIG SRA Run Selector	Charles Lin	Apr 02, 2010
GSE21172	Developmental Regulation and Individual Differences of Neuronal Epigenomes in the Prefrontal Cortex	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	14	WIG SRA Run Selector	Hennady Shulha	Apr 20, 2010
GSE15844	Genome-wide mapping of Nuclear Factor I binding sites using ChIP-Seq in WT and NFI-C knock-out MEFs	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED SGA TXT WIG SRA Run Selector	Milos Pjanic	Apr 24, 2010
GSE20725	ChIP-seq of PHF8 and H3K4me3	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	10	BED WIG SRA Run Selector	Klaus Fortschegger	Apr 27, 2010