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2329 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			WIG
GSE59773	Insights into the epigenomic landscape of the human malaria vector Anopheles gambiae	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Anopheles gambiae	5	BED FPKM_TRACKING GTF WIG SRA Run Selector	Elena Gómez-Díaz	Sep 04, 2014
GSE25446	Genome-wide comparison of H3K27me3 difference between ref6-1 and wild type Col	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	TXT WIG SRA Run Selector	Falong Lu	May 25, 2011
GSE25447	Jumonji C domain-containing protein 12 is a Histone H3 Lysine 27 Demethylase	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	6	CEL TXT WIG	Falong Lu	May 25, 2011
GSE35315	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	TXT WIG SRA Run Selector	Eunkyoo Oh	Jul 08, 2012
GSE36629	Dynamic Deposition of the Histone H3.3 Variant Accompanies Developmental Remodeling of Arabidopsis Transcriptome (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	16	WIG SRA Run Selector	Pierre-Étienne Jacques	May 16, 2012
GSE36631	Dynamic Deposition of the Histone H3.3 Variant Accompanies Developmental Remodeling of Arabidopsis Transcriptome	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	20	TAB WIG	Pierre-Étienne Jacques	May 16, 2012
GSE37160	Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	10	TXT WIG	Eunkyoo Oh	Jul 08, 2012
GSE37644	MORC family ATPases required for heterochromatin condensation and gene silencing	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	26	TXT WIG SRA Run Selector	Shawn J. Cokus	May 03, 2012
GSE39247	The DDR complex facilitates the genome-wide association of RNA Polymerase V to promoters and evolutionarily young transposons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	11	WIG SRA Run Selector	Christopher Joel Hale	Aug 05, 2012
GSE40329	Investigating putative RPS4-chromatin associations during Arabidopsis plant disease resistance, using a temperature-inducible system which resembles pathogen-infection	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	WIG SRA Run Selector	Servane Baufume	Sep 02, 2017
GSE42695	Genome-wide profiling of long non-coding RNAs in Arabidopsis	Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	TXT WIG SRA Run Selector	Yijun Qi	Nov 28, 2015
GSE45368	Polymerase-IV occupancy at RNA-directed DNA methylation sites requires SHH1	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	28	WIG SRA Run Selector	Christopher Joel Hale	May 13, 2013
GSE49090	Interplay Between Active Chromatin Marks and RNA-directed DNA Methylation in Arabidopsis thaliana	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	34	WIG SRA Run Selector	Christopher Joel Hale	Nov 01, 2013
GSE49282	Identification of Arabidopsis thaliana PRR7 regulated clock components and circadian outputs through genome-wide binding sites analysis	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	6	TXT WIG SRA Run Selector	Tiffany L Liu	Jul 27, 2013
GSE50942	The Histone Variant H2A.W Defines Heterochromatin and Promotes Chromatin Condensation in Arabidopsis	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Arabidopsis thaliana	10	TXT WIG SRA Run Selector	Hume Stroud	Jul 05, 2014
GSE51120	A basic helix-loop-helix transcription factors network mediates the brassinosteroid signal [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	BED WIG SRA Run Selector	Kengo Morohashi	Mar 05, 2014
GSE51121	A basic helix-loop-helix transcription factors network mediates the brassinosteroid signal	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	12	WIG	Kengo Morohashi	Mar 05, 2014
GSE51304	Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Arabidopsis thaliana	48	TXT WIG SRA Run Selector	Hume Stroud	Dec 15, 2013
GSE51770	Interactions of ARF6 with PIF4, BZR1, and RGA integrate auxin signaling with environmental and other hormonal signals in Arabidopsis [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	2	WIG SRA Run Selector	Eunkyoo Oh	Jun 03, 2014
GSE52041	SRA/SET domain-containing proteins link RNA polymerase V occupancy to DNA methylation	Non-coding RNA profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Arabidopsis thaliana	18	WIG SRA Run Selector	Christopher Joel Hale	Jan 01, 2014