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940 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			XLSX
GSE115294	Genome-wide mapping of Yap1 in the normal and hypertrophied hearts	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BW XLSX SRA Run Selector	Maha Abdellatif	Jun 05, 2018
GSE165279	The effect of diet on H3K9-butyryl and H3K9-acetyl in the heart before and after transverse aortic constriction in C57Bl/6J mice	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	14	BW XLSX SRA Run Selector	Maha Abdellatif	May 11, 2021
GSE165284	ACAA2 genome-binding patterns before and after transverse aortic constriction in C57Bl/6J mice on different diets [ACAA2]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW XLSX SRA Run Selector	Maha Abdellatif	May 11, 2021
GSE227226	The effect of a BCCA-free, with 1% propionate, diet on 1W pressure overload-induced H3K23-propionyl [BCAA-free-1W-TAC with propionate-ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW XLSX	Maha Abdellatif	Aug 25, 2023
GSE227227	The effect of a BCCA-free diet on 1W pressure overload-induced H3K23-propionyl [BCAA-free-1W-TAC-ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BW XLSX	Maha Abdellatif	Aug 25, 2023
GSE227228	The effect of a BCCA-free diet on 2W pressure overload-induced H3K23-propionyl [BCAA-free-2W-TAC-ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BW XLSX	Maha Abdellatif	Aug 25, 2023
GSE223878	RREB1 Regulates Neuronal Proteostasis and Microtubule Network Function [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	XLSX	Susan Ackerman	Jan 01, 2024
GSE189944	Fine-tuned KDM1A alternative splicing regulates human cardiomyogenesis through an enzymatic-independent mechanism	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	68	NARROWPEAK XLSX SRA Run Selector	Antonio Adamo	Jul 01, 2022
GSE198517	Inhibition of SWI/SNF broadly disrupts enhancers and reveals remodeler redundancy at promoters	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	107	BW TSV XLSX	Karen Adelman	Nov 02, 2023
GSE130384	Cdk5-mediated phosphorylation ensures robust neuronal differentiation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	24	BED BW XLSX SRA Run Selector	Swarnaseetha Adusumalli	Nov 29, 2019
GSE129156	Genome-wide maps of H3K9me3 in hematopoietic stem cells from Kdm4a, b, c triple knockout mice	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus	2	XLSX SRA Run Selector	Karl Agger	Apr 02, 2019
GSE181838	Enhancer analysis by H3K27ac ChIP-seq in HNSCC T-HEP3 and D-HEp3 cell lines	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BW TXT XLSX SRA Run Selector	Julio A Aguirre-Ghiso	Apr 27, 2023
GSE126767	MondoA Links Muscle Lipid Accumulation and Insulin Resistance Driven by Nutrient Overload	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	9	BW XLSX	Byungyong Ahn	Aug 22, 2019
GSE207789	FAK is required for suppressing aberrant nuclear mechanotransduction and DNA methylation to prevent vascular injury	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	XLSX	Md Zahid Akhter	Jul 11, 2022
GSE165977	The effect of STAG2 loss in Ewing sarcoma [HiChIP]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TBI TXT XLSX SRA Run Selector	Gabriela Alexe	May 14, 2021
GSE223182	Integrated chromatin accessibility and gene expression landscape of human triple-negative breast cancer cell lines reveals variation by patient donor ancestry [Bulk ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	50	XLSX	Stefan Ambs	Sep 27, 2023
GSE216542	scRNA-seq, snATAC-seq, and spatial transcriptomics analysis of mammary glands of aged female mice	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	22	CSV JPG JSON MTX PNG RDS TIFF TSV TXT XLSX	Olga Anczukow	Sep 29, 2024
GSE160667	Enhancer analysis of HER2+ cell lines SKBR-3 (ER-) and BT474m1 (ER+) in response to lapatinib and JQ1 and analysis of FOXA1 chromatin binding in SKBR-3 cells in response to lapatinib and JQ1 and impact of FOXA1 knockdown on BRD4 and MED1	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	42	BW XLSX SRA Run Selector	Steven P Angus	Nov 03, 2020
GSE109684	E2F4 regulates transcriptional activation in mouse embryonic stem cells independently of the RB family	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	XLSX SRA Run Selector	Julia Arand	Apr 25, 2019
GSE128466	Eomes and Brachyury control pluripotency exit and germ-layer segregation by changing the chromatin state	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	82	BED BIGWIG TXT XLSX SRA Run Selector	Sebastian J. Arnold	Dec 02, 2019