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20 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus				Jul 24, 2023
GSE231411	Zfp296 knockout enhances chromatin accessibility and induces a unique state of pluripotency in embryonic stem cells [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	NARROWPEAK	Daisuke Motooka	Jul 24, 2023
GSE232169	Chromatin accessibility in peri-infarct neurons on day 4 after ischemic stroke [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BW	Akari Nakamura	Jul 24, 2023
GSE231410	Zfp296 knockout enhances chromatin accessibility and induces a unique state of pluripotency in embryonic stem cells [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	NARROWPEAK	Daisuke Motooka	Jul 24, 2023
GSE232171	Distribution of histone-3-citrullinated sites in peri-infarct neurons on day 4 after ischemic stroke	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BW	Akari Nakamura	Jul 24, 2023
GSE228372	Efficient genome editing in erythroid cells unveils novel MYB target genes and regulatory functions	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED	Eric Soler	Jul 24, 2023
GSE220245	Regulatory changes associated with the head to trunk developmental transition [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BW	Patrícia Duarte	Jul 24, 2023
GSE237811	HMGB2 regulates the differentiation and stemness of exhausted CD8+ T cells during chronic viral infection and cancer [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	TXT	Roberto Tinoco	Jul 24, 2023
GSE156743	Myc regulates the lineage commitment of transformed hepatocytes during liver tumorigenesis (ATAC-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	XLS SRA Run Selector	Iros Barozzi	Jul 24, 2023
GSE237967	A novel CRISPR/Cas9 screening platform identifies an IRF1-SOCS1-mediated negative feedback loop that limits CXCL9 expression and anti-tumor immunity (AT3 ATAC-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK	Kevin C sek	Jul 24, 2023
GSE237972	A novel CRISPR/Cas9 screening platform identifies an IRF1-SOCS1-mediated negative feedback loop that limits CXCL9 expression and anti-tumor immunity (IRF1 ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK	Kevin C sek	Jul 24, 2023
GSE231412	Zfp296 knockout enhances chromatin accessibility and induces a unique state of pluripotency in embryonic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	NARROWPEAK TXT	Daisuke Motooka	Jul 24, 2023
GSE220247	Regulatory changes associated with the head to trunk developmental transition	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BW	Patrícia Duarte	Jul 24, 2023
GSE234703	Pioneer activity distinguishes activating from non-activating SOX2 binding sites [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BW NARROWPEAK	Elzo de Wit	Jul 24, 2023
GSE156746	Myc regulates the lineage commitment of transformed hepatocytes during liver tumorigenesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	TSV XLS	Iros Barozzi	Jul 24, 2023
GSE237813	HMGB2 regulates the differentiation and stemness of exhausted CD8+ T cells during chronic viral infection and cancer.	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	23		Roberto Tinoco	Jul 24, 2023
GSE209527	Continuous pioneer activity is required for maintaining pluripotency specific gene expression [ATAC-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	45	BW NARROWPEAK TSV	Elzo de Wit	Jul 24, 2023
GSE155229	Genome-wide analysis of enhancers repressed by Nkx2.2 in spinal motor neuron progenitors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	TXT SRA Run Selector	Elena Abarinov	Jul 24, 2023
GSE209529	Continuous pioneer activity is required for maintaining pluripotency specific gene expression	Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	66	BW NARROWPEAK	Elzo de Wit	Jul 24, 2023
GSE216521	Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	68	H5	Samantha Morris	Jul 24, 2023
GSE140925	Arid1a in mouse embryonic cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	149	BIGWIG	Ze-guang Han	Jul 24, 2023