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13337 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus
GSE13622	The DNA-Encoded Nucleosome Organization of a Eukaryotic Genome	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus Saccharomyces cerevisiae synthetic construct	8	TAB TXT SRA Run Selector	Desiree Tillo	Dec 18, 2008
GSE14344	esBAF is an essential component of the core pluripotency transcriptional network	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CEL TXT SRA Run Selector	Raja Jothi	Jan 20, 2009
GSE15519	Expression and ChIP-seq analyses of embryonic stem cells, extraembryonic endoderm stem cells, and trophoblast stem cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CEL CHP WIG SRA Run Selector	Brian Joseph Cox	May 17, 2010
GSE15909	Gene expression and UH2A ChIP-Seq binding analysis in Bmi1 knock-out and wild type MEFs	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	4	BED CEL CHP TXT	Raja Jothi	May 20, 2009
GSE16375	Uncovering early response of gene regulatory networks in ES cells by systematic induction of transcription factors	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	342	TXT	Minoru S.H. Ko	Oct 01, 2009
GSE17067	A quantitative model of transcription regulation reveals the role of non-conserved enhancers	Expression profiling by array Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	28	BED CEL GPR TXT SRA Run Selector	Kenzie MacIsaac	May 13, 2010
GSE18125	Epigenetic regulation of Bmp2 and Smad6 in Ras-induced senescence	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BED CEL SRA Run Selector	Atsushi Kaneda	Dec 22, 2011
GSE18829	Discovering Hematopoietic Mechanisms Through Genome-Wide Analysis of GATA Factor Chromatin Occupancy	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	11	BED TXT	Emery H. Bresnick	Nov 25, 2009
GSE19198	Analysis of interleukin-21-induced Prdm1 gene regulation reveals functional cooperation of STAT3 and IRF4 TFs	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	56	CEL SRA Run Selector	Warren J Leonard	Jan 08, 2010
GSE20752	Comparative Epigenomic Analysis of Murine and Human Adipogenesis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by array	Homo sapiens Mus musculus	111	CEL TXT WIG	Tarjei S Mikkelsen	Sep 30, 2010
GSE21202	CpG islands recruit a histone H3 lysine 36 demethylase	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	6	TAB TXT	Peter J Park	Apr 27, 2010
GSE21512	Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52	BED FA TXT SRA Run Selector	Christopher Benner	May 27, 2010
GSE21529	Cardiac transcription factors in HL-1 cells: gene expression and genome binding profiling	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	CEL GFF TXT SRA Run Selector	Sek Won Kong	Mar 02, 2011
GSE21621	Cell-Type-Specific TGF-beta Signaling is Targeted to Genes that Control Cell Identity	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	22	TXT WIG	Richard A Young	Aug 24, 2011
GSE21671	Diverse Targets of the Transcription Factor STAT3 Contribute to T Cell Pathogenicity and Homeostasis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	19	BED BEDGRAPH CEL	Golnaz Vahedi	May 30, 2010
GSE21953	PU.1 in normal erythroid progenitors and erythroleukemia cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	15	BED CEL CHP	Sandeep Nagaraj Wontakal	Jun 23, 2011
GSE21978	A global network of transcription factors, involving E2A, EBF1 and FOXO1, that orchestrates the B cell fate	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BED FA TXT SRA Run Selector	Christopher Benner	Jun 13, 2010
GSE22105	Discrete Roles of STAT4 and STAT6 Transcription Factors in Tuning Epigenetic Modifications and Transcription during Helper T Cell Differentiation	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	21	BED BEDGRAPH CEL TXT	Golnaz Vahedi	Jun 18, 2010
GSE22341	CHD7 targets active gene enhancer elements to modulate ES cell-specific gene expression.	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	SGR TXT SRA Run Selector	Mike Paul Schnetz	Jun 16, 2010
GSE22557	Control of Embryonic Stem Cell State by Mediator and Cohesin	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	TXT WIG	Richard A Young	Aug 12, 2010