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3993 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BED
GSE59801	Comparative epigenomics of human and mouse erythropoiesis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Austrofundulus limnaeus Homo sapiens Mus musculus		BED BW TXT	Vijay G Sankaran	Dec 01, 2014
GSE80791	CpG island mediated linear and spatial gene partitioning (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Mus musculus		BED	Jonghwan Kim	Feb 15, 2018
GSE27919	Genome-wide map of DNaseI hypersensitivity in mouse erythroid cells.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SAM	Monika S Kowalczyk	Jan 30, 2012
GSE37190	HITS-CLIP analysis of FUS in lineage-committed cells.	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Akio Masuda	Jul 26, 2012
GSE40423	Genome-wide maps of Foxa2 binding sites in mouse embryonic stem cell-derived definitive endoderm cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Chenhuan Xu	Aug 29, 2012
GSE40667	CTCF binding patterns in mouse trophoblast stem cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED TXT WIG SRA Run Selector	J Mauro Calabrese	Sep 08, 2012
GSE41677	Latent enhancers unveiled by stimulation expand and adapt the available cis-regulatory repertoire (FAIRE-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Iros Barozzi	Jan 17, 2013
GSE44821	Genome-wide occupancy profile of Tbx3 in adult mouse whole heart	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BIGWIG SRA Run Selector	Vincent M. Christoffels	Mar 05, 2013
GSE49413	Fine Tuning of Craniofacial Morphology by Distant-Acting in vivo Enhancers	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED WIG SRA Run Selector	Alex S Nord	Nov 06, 2013
GSE53502	YY1 ChIP-seq in mouse intestine	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED WIG SRA Run Selector	Michael P Verzi	Apr 29, 2014
GSE54963	High-resolution Brachyury DNA-binding Sites Mapping by ChIP-exo	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Zhe Liu	Mar 10, 2014
GSE65093	Base-resolution methylation patterns accurately predict transcription factor bindings in vivo	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Bing Yao	Mar 02, 2015
GSE69671	Tip60 complex binds to active Pol II promoters and a subset of enhancers and co-regulates the c-Myc network in mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Sarina Ravens	Nov 06, 2015
GSE71863	Whole genome nucleosome positioning by MNase-Seq on the mouse tumor line, RMA	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Andrew Makrigiannis	Apr 28, 2016
GSE74901	H3K4me2 profiling in C3H-10T1/2 preadipocytes [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BW SRA Run Selector	Wei Qi	Aug 30, 2016
GSE83169	DNase-seq from liver (ENCSR216UMD)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BIGBED BIGWIG TXT	ENCODE DCC	Jun 22, 2016
GSE83180	DNase-seq from embryo (ENCSR723IXU)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BIGBED BIGWIG TXT	ENCODE DCC	Jun 22, 2016
GSE83181	DNase-seq from lung (ENCSR742DUR)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BIGBED BIGWIG TXT	ENCODE DCC	Jun 22, 2016
GSE83184	DNase-seq from forebrain (ENCSR791AJY)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED BIGBED BIGWIG TXT	ENCODE DCC	Jun 22, 2016
GSE121464	Tbx3 governs a transcriptional program to maintain atrioventricular conduction system form and function [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	1	BED SRA Run Selector	Vincent M. Christoffels	Oct 18, 2019