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1179 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BEDGRAPH
GSE205783	Sequential and directional insulation by conserved CTCF sites underlies the Hox timer in stembryos	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	170	BEDGRAPH BIGWIG COOL NARROWPEAK TXT	Lucille Lopez-Delisle	Apr 28, 2023
GSE244758	The Transcription factor NF-YA is Crucial for Neural Progenitor Maintenance during Brain Development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BEDGRAPH NARROWPEAK	Tomoyuki Yamanaka	Jan 11, 2024
GSE69180	1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BED BEDGRAPH TXT	Mark B Meyer	Jun 03, 2015
GSE69179	1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (ChIP-seq)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED BEDGRAPH SRA Run Selector	Mark B Meyer	Jun 03, 2015
GSE77645	4C-ker: A method to reproducibly identify genome-wide interactions captured by 4C-Seq experiments	Genome binding/occupancy profiling by high throughput sequencing Other Expression profiling by high throughput sequencing	Mus musculus	16	BED BEDGRAPH TXT SRA Run Selector	Jane Skok	Feb 27, 2016
GSE111190	4Cseq analysis of neural stem/progenitor cells (NSC) from wild type and Sox2-deleted mouse neonatal forebrain	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	46	BEDGRAPH SRA Run Selector	Federico Zambelli	Mar 07, 2019
GSE27060	A Bcl6-Smrt/Ncor repression program controls atherosclerosis	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	10	BEDGRAPH TXT	Ruth T Yu	Mar 30, 2012
GSE147925	A Macrophage-Hepatocyte Glucocorticoid Receptor Axis Coordinates Fasting Ketogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	192	BEDGRAPH	Anne Loft	Jan 27, 2022
GSE63271	A Novel Neuron-specific Histone H4K20 Demethylase LSD1n Promotes Transcriptional Elongation and is Essential for Learning and Memory	Expression profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	41	BED BEDGRAPH SRA Run Selector	Yuliang Tan	Jul 27, 2015
GSE216272	A PPARγ-lncRNA axis modulates thermoneutral remodeling of white adipose tissue	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BEDGRAPH	Zhengyi Zhang	Sep 27, 2023
GSE123388	A Preformed Chromatin Architecture Ensures Robust Shh Transcription during Limb Development	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	54	BEDGRAPH BW	Christina Paliou	May 13, 2019
GSE72481	A Primary Role of TET Proteins in Establishment and Maintenance of De Novo Bivalency at CpG Islands of Developmental Genes	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BED BEDGRAPH SRA Run Selector	Ruitu Lyu	Jul 25, 2016
GSE119991	A SUMOylation-induced Satb1/Satb2 switch drives embryonic stem cell differentiation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Other	Mus musculus	57	BEDGRAPH H5	Pierre Daniel Cauchy	Jul 08, 2021
GSE119989	A SUMOylation-induced Satb1/Satb2 switch drives embryonic stem cell differentiation [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	32	BEDGRAPH SRA Run Selector	Pierre Daniel Cauchy	Jul 08, 2021
GSE98662	A Shared Runx1-bound Zbtb16 Enhancer Directs Innate and Innate-Like Lymphoid Lineage Development	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	11	BED BEDGRAPH SRA Run Selector	Aiping Mao	Jul 27, 2017
GSE67357	A Stringent Systems Approach Uncovers Gene-Specific Mechanisms Regulating Inflammation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	166	BEDGRAPH	Stephen Smale	Jan 18, 2016
GSE74191	A Stringent Systems Approach Uncovers Gene-Specific Mechanisms Regulating Inflammation [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BEDGRAPH SRA Run Selector	Stephen Smale	Jan 18, 2016
GSE67343	A Stringent Systems Approach Uncovers Gene-Specific Mechanisms Regulating Inflammation [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BEDGRAPH SRA Run Selector	Stephen Smale	Jan 18, 2016
GSE71327	A Surveillance System of Active Enhancers by a RACK7-histone Demethylase Complex	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	45	BEDGRAPH FPKM_TRACKING TXT	Yang Shi	Apr 07, 2016
GSE45457	A Switch Between Topological Domains Underlies HoxD Genes Collinearity in Mouse Limbs	Genome binding/occupancy profiling by genome tiling array Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	29	BEDGRAPH CEL	Marion LELEU	Jun 07, 2013