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2227 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		BIGWIG
GSE29184	A draft map of cis-regulatory sequences in the mouse genome	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome variation profiling by high throughput sequencing	Mus musculus	143	BAM BIGWIG BOWTIE TXT	Bing Ren	Jul 01, 2012
GSE29218	A draft map of cis-regulatory sequences in the mouse genome [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	122	BAM BIGWIG BOWTIE TXT SRA Run Selector	Bing Ren	Jul 01, 2012
GSE30959	Control of Embryonic Stem Cell Lineage Commitment by Core Promoter Factor, TAF3	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	23	BIGWIG TXT	Devin Scannell	Sep 02, 2011
GSE31039	Histone Modifications by ChIP-seq from ENCODE/LICR	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	133	BIGWIG BROADPEAK TXT SRA Run Selector	ENCODE DCC	Jul 30, 2011
GSE31851	Genome-wide activity-dependent MeCP2 phosphorylation regulates nervous system development and function	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	35	BIGWIG CEL CHP	Harrison Wren Gabel	Sep 08, 2011
GSE31951	Genome-wide activity-dependent MeCP2 phosphorylation regulates nervous system development and function [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	9	BIGWIG SRA Run Selector	Harrison Wren Gabel	Sep 08, 2011
GSE32218	Histone Modifications by ChIP-seq from ENCODE/Stanford/Yale	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	22	BIGWIG NARROWPEAK SRA Run Selector	ENCODE DCC	Sep 20, 2011
GSE33679	Selective Functions of Individual Zinc Fingers Within the DNA-Binding Domain of Ikaros (ChIP-seq: Thymocytes)	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	6	BAM BIGWIG TXT SRA Run Selector	Hilde Schjerven	Sep 08, 2013
GSE33693	Selective Functions of Individual Zinc Fingers Within the DNA-Binding Domain of Ikaros	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	31	BAM BEDGRAPH BIGWIG SAM TXT	Hilde Schjerven	Sep 08, 2013
GSE33821	A functional map of DNA-associated proteolysis	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BIGWIG SRA Run Selector	Andre Catic	Dec 01, 2013
GSE35151	Genome-wide occupancy profile of Tbx3, Gata4, Nkx2-5 and p300 in adult mouse whole heart	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	5	BIGWIG TXT WIG SRA Run Selector	Vincent M. Christoffels	Jun 22, 2012
GSE35370	Essential and unexpected role of YY1 to promote mesodermal cardiac differentiation	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	3	BED BIGWIG SRA Run Selector	Serge Gregoire	Jun 01, 2013
GSE36023	Histone Modifications by ChIP-seq from ENCODE/Caltech	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	17	BIGWIG NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Apr 19, 2012
GSE36024	Transcription Factor Binding Sites by ChIP-seq from ENCODE/Caltech	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BIGWIG NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Apr 13, 2012
GSE36027	Transcription Factor Binding Sites by ChIP-seq from ENCODE/LICR	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	60	BIGWIG BROADPEAK TXT SRA Run Selector	ENCODE DCC	Apr 19, 2012
GSE36028	Histone Modifications by ChIP-seq from ENCODE/PSU	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	30	BIGWIG BROADPEAK TXT SRA Run Selector	ENCODE DCC	Jun 11, 2012
GSE36029	Transcription Factor Binding Sites by ChIP-seq from ENCODE/PSU	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BIGWIG BROADPEAK TXT SRA Run Selector	ENCODE DCC	Apr 30, 2012
GSE36030	Transcription Factor Binding Sites by ChIP-seq from ENCODE/Stanford/Yale	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	85	BIGWIG NARROWPEAK TXT SRA Run Selector	ENCODE DCC	Apr 11, 2012
GSE37074	DNaseI Hypersensitivity by Digital DNaseI from ENCODE/University of Washington	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	53	BIGWIG BROADPEAK NARROWPEAK SRA Run Selector	ENCODE DCC	Oct 03, 2012
GSE39154	Ogt chromatin recruitment is mediated by TET proteins in mouse ES cells [ChIP-Seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	BIGWIG SRA Run Selector	Sri Ganesh Jammula	Jan 06, 2013