GEO Browser - GEO

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325 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Mus musculus		CEL
GSE42478	Defining a molecular roadmap of cellular reprogramming into iPS cells	Expression profiling by array Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by genome tiling array	Betapolyomavirus hominis Betapolyomavirus macacae Homo sapiens Human alphaherpesvirus 1 Human alphaherpesvirus 2 Human betaherpesvirus 5 Human gammaherpesvirus 8 Human immunodeficiency virus 1 JC polyomavirus Merkel cell polyomavirus Murid betaherpesvirus 1 Murid gammaherpesvirus 4 Mus musculus Rattus norvegicus human gammaherpesvirus 4	61	BIGWIG CEL PAIR TXT	Ben S. Wittner	Dec 20, 2012
GSE32120	The little elongation complex (LEC) regulates small nuclear RNA transcription	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Drosophila melanogaster Mus musculus	22	BED CEL SRA Run Selector	Alexander (Garrett) Garruss	Dec 22, 2011
GSE34304	Poised RNA Polymerase II changes over developmental time and prepares genes for future expression	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Mus musculus	89	BAM BED CEL	Julia Zeitlinger	Dec 20, 2012
GSE20752	Comparative Epigenomic Analysis of Murine and Human Adipogenesis	Expression profiling by array Non-coding RNA profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	111	CEL TXT WIG	Tarjei S Mikkelsen	Sep 30, 2010
GSE23436	Histone methylation and transcription factor binding during intestinal cell differentation	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	17	BED BW CEL TXT SRA Run Selector	Michael P Verzi	Nov 17, 2010
GSE26565	Reprogramming of mesenchymal stem cells by the synovial sarcoma-associated oncogene SYT-SSX2	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	10	BED CEL TXT	Josiane Eid	Sep 26, 2011
GSE28332	The Demethylase JMJD2C/KDM4C Localizes to H3K4me3 Positive Transcription Start Sites	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	30	BEDGRAPH CEL	Marianne Terndrup Pedersen	Jan 09, 2014
GSE30268	Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC).	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	34	CEL TXT	Alexander (Garrett) Garruss	Jul 19, 2011
GSE43022	ZFX controls the propagation and cell-of-origin characteristics of acute leukemia	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	32	BED CEL	Stuart Weisberg	Jan 30, 2014
GSE43069	MLL-AF6 leukemia	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	10	CEL WIG	Amit Sinha	Apr 03, 2013
GSE43900	Co-ordinate inhibition of autism candidate genes by topoisomerase inhibitors	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by array	Homo sapiens Mus musculus	70	CEL TXT	Chandri Yandava	Aug 30, 2013
GSE43963	Mtg16 regulates E protein activity and lineage specification in dendritic cell development	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	5	BED CEL	Hiyaa Singhee Ghosh	Jun 13, 2014
GSE52824	Derivation of novel human ground state naïve pluripotent stem cells.	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	71	BED CEL TXT	Noa Novershtern	Nov 29, 2013
GSE56065	PRDM11: a novel tumor suppressor	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	23	BED CEL	Anders H Lund	Mar 02, 2015
GSE57312	ChIP-seq and RNA-seq study of human FXR in primary human hepatocytes and microarray analysis of GW4064 versus vehicle treated wild type mouse livers	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	12	CEL CHP	Le Zhan	Jul 22, 2014
GSE60605	An alternative pluripotent state confers interspecies chimaeric competency	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Macaca mulatta Mus musculus Pan troglodytes	42	BIGWIG CEL TSV	Christopher Benner	May 06, 2015
GSE61022	DOT1L Inhibits SIRT1 and SUV39H1-Mediated H3K9 Modification to Maintain Gene Expression	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	44	BW CEL TDF	Richard Koche	Mar 30, 2015
GSE61881	Divergent transcriptional activation by glucocorticoids in mouse and human macrophages is the result of gain and loss of enhancers	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	52	CEL	Alasdair W Jubb	Dec 17, 2015
GSE61933	Pluripotent stem cells reveal novel erythroid activities of the GATA1 N-terminus	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Homo sapiens Mus musculus	24	BROADPEAK BW CEL	Ross Hardison	Jan 26, 2015
GSE67823	Master transcription factors in corneal epithelial cells	Expression profiling by array Other Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	41	BED BIGWIG CEL TXT	Koji Kitazawa	Apr 11, 2016